e-learning
Unicycler Assembly
Abstract
The goal: E. coli C-1 assembly
About This Material
This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.
Questions this will address
- I have short reads and long reads. How do I assemble a genome?
Learning Objectives
- Perform Quality Control on your reads
- Perform a Small genome Assembly with Unicycler
- Evaluate the Quality of the Assembly with Quast
- Annotate the assembly with Prokka
Licence: Creative Commons Attribution 4.0 International
Keywords: Assembly, microgalaxy, prokaryote
Target audience: Students
Resource type: e-learning
Version: 23
Status: Active
Prerequisites:
- Introduction to Galaxy Analyses
- Quality Control
Learning objectives:
- Perform Quality Control on your reads
- Perform a Small genome Assembly with Unicycler
- Evaluate the Quality of the Assembly with Quast
- Annotate the assembly with Prokka
Date modified: 2024-03-13
Date published: 2017-10-11
Scientific topics: Sequence assembly, Genomics, Microbiology
External resources:
Activity log
