e-learning
Visualize EBV cube data with Panoply netCDF viewer
Abstract
The practical aims at familiarzing you with the Panoply Galaxy interactive tool. Panoply is among the most popular tool to visualize geo-referenced data stored in Network Common Data Form (netCDF). It provides a graphical interface for inspecting (show metadata) and visualizing netCDF data. It supports many features to customize your plots and we will introduce some of them in this lesson.
About This Material
This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.
Questions this will address
- How to start Panoply interactive environment in Galaxy?
- How to inspect EBV cube netCDF data?
- How to make a plot with Panoply?
- Where to save your plots in Panoply?
- How to customize plots in Panoply?
- How to generate animation in Panoply?
Learning Objectives
- Learn to use Panoply in Galaxy to visuallize EBV cube netCDF geo-referenced data
- Learn how Panoply plots are exported to Galaxy
Licence: Creative Commons Attribution 4.0 International
Keywords: Data visualization, EBV cube, Ecology, interactive-tools
Target audience: Students
Resource type: e-learning
Version: 9
Status: Active
Prerequisites:
Introduction to Galaxy Analyses
Learning objectives:
- Learn to use Panoply in Galaxy to visuallize EBV cube netCDF geo-referenced data
- Learn how Panoply plots are exported to Galaxy
Date modified: 2024-06-27
Date published: 2022-10-28
Contributors: Helena Rasche, Saskia Hiltemann, Yvan Le Bras
Scientific topics: Ecology
Activity log
