Training materials
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e-learning
Building an amplicon sequence variant (ASV) table from 16S data using DADA2
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy -
e-learning
Metatranscriptomics analysis using microbiome RNA-seq data
• beginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
e-learning
16S Microbial Analysis with mothur (extended)
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy -
e-learning
16S Microbial Analysis with mothur (short)
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy -
e-learning
Assembly of metagenomic sequencing data
• beginnerMetagenomics Microbial ecology Sequence assembly Microbiome assembly metagenomics microgalaxy -
e-learning
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• intermediateGenetic variation Variant Analysis covid19 one-health virology -
e-learning
CLIP-Seq data analysis from pre-processing to motif detection
• beginnerTranscriptomics -
e-learning
Machine learning: classification and regression
• beginnerStatistics and probability Statistics and machine learning -
e-learning
Pre-processing of Single-Cell RNA Data
• beginnerSingle Cell -
e-learning
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis