Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Biological sequences3
    • Sequence analysis3
    • Sequence databases3
    • Antimicrobial stewardship2
    • De novo genome sequencing2
    • Exomes2
    • Genome annotation2
    • Genome sequencing2
    • Genomes2
    • Genomics2
    • Medical microbiology2
    • Microbial genetics2
    • Microbial physiology2
    • Microbial surveillance2
    • Microbiological surveillance2
    • Microbiology2
    • Molecular infection biology2
    • Molecular microbiology2
    • Personal genomics2
    • Synthetic genomics2
    • Viral genomics2
    • WGS2
    • Whole genome resequencing2
    • Whole genome sequencing2
    • Whole genomes2
    • AMR1
    • Antibiotic resistance (ABR)1
    • Antifungal resistance1
    • Antimicrobial resistance1
    • Antiprotozoal resistance1
    • Antiviral resistance1
    • Communicable disease1
    • Epidemiology1
    • Extensive drug resistance (XDR)1
    • Functional genomics1
    • Gene and protein families1
    • Gene families1
    • Gene family1
    • Gene system1
    • Genes, gene family or system1
    • Genetic linkage1
    • Infectious disease1
    • Linkage1
    • Linkage mapping1
    • Mapping1
    • Mobile genetic elements1
    • Multidrug resistance1
    • Multiple drug resistance (MDR)1
    • Multiresistance1
    • Pandrug resistance (PDR)1
    • Protein families1
    • Protein sequence classification1
    • Public health1
    • Public health and epidemiology1
    • Synteny1
    • Total drug resistance (TDR)1
    • Transmissible disease1
    • Transposons1
    • Show N_FILTERS more
    • Tool
    • JBrowse
    • Galaxy44
    • FastQC11
    • SAMtools7
    • taxonomy_krona_chart7
    • Cutadapt6
    • MultiQC6
    • fastp5
    • kraken25
    • Bandage4
    • DeepTools4
    • Falco4
    • KrakenTools4
    • MetaPhlAn4
    • BEDTools3
    • BamTools3
    • Bowtie 23
    • Bracken3
    • HUMAnN23
    • NanoPlot3
    • Newick Utilities3
    • QUAST3
    • STAR3
    • ggplot23
    • mothur3
    • BCFtools2
    • Bakta2
    • FastTree2
    • Flye2
    • GraPhlAn2
    • Minimap22
    • Recentrifuge2
    • SortMeRNA2
    • export2graphlan2
    • humann2
    • seqtk2
    • tbl2gff32
    • ABRicate1
    • BLAST1
    • BWA1
    • Bowtie1
    • Bwa-mem21
    • CheckM1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • DESeq21
    • FASTQE1
    • FeatureCounts1
    • Filtlong1
    • FreeBayes1
    • GEMINI1
    • GOseq1
    • ISEScan1
    • Integron Finder1
    • JBrowse 21
    • Krona1
    • MACS1
    • MEGAHIT1
    • MEME1
    • MLST1
    • Medaka1
    • NCBI Datasets1
    • NGSUtils1
    • Nextclade1
    • PPanGGOLiN1
    • Peakachu1
    • PlasmidFinder1
    • Polypolish1
    • R1
    • RCAS1
    • RSeQC1
    • SCANPY1
    • TRANSIT1
    • Trim Galore1
    • Trimmomatic1
    • UCSC Genome Browser Utilities1
    • UMI-tools1
    • bx-python1
    • dRep1
    • dada21
    • metaspades1
    • pangolin1
    • pathview1
    • phyloseq1
    • pyGenomeTracks1
    • pycoQC1
    • scikit-learn1
    • shovill1
    • staramr1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training3
    • Show N_FILTERS more
    • Keyword
    • Genome Annotation2
    • gmod2
    • illumina2
    • jbrowse12
    • microgalaxy2
    • Sequence analysis1
    • amr1
    • bacteria1
    • one-health1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Bérénice Batut
    • Anthony Bretaudeau6
    • Helena Rasche2
    • Romane LIBOUBAN2
    • Simon Gladman2
    • Anna Syme1
    • Bazante Sanders1
    • Joachim Wolff1
    • Mateo Boudet1
    • Nathan Dunn1
    • Peter van Heusden1
    • Thoba Lose1
    • Torsten Seemann1
    • Show N_FILTERS more
    • Contributor
    • Anthony Bretaudeau3
    • Björn Grüning3
    • Bérénice Batut3
    • Helena Rasche3
    • Saskia Hiltemann2
    • Teresa Müller2
    • Bazante Sanders1
    • Deepti Varshney1
    • Ekaterina Polkh1
    • Maria Doyle1
    • Mehmet Tekman1
    • Miaomiao Zhou1
    • Niall Beard1
    • Nicola Soranzo1
    • Paul Zierep1
    • William Durand1
    • pimarin1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets3
    • Associated Workflows3
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Tools: JBrowse

and Authors: Bérénice Batut

and Resource type: e-learning

3 e-learning materials found
  • e-learning

    Bacterial Genome Annotation

    • beginner
    Genomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod …
  • e-learning

    Identification of AMR genes in an assembled bacterial genome

    • beginner
    Genomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod …
  • e-learning

    Mapping

    • beginner
    Sequence analysis Mapping
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.