Training materials
Authors: Bazante Sanders
and Licence: Creative Commons Attribution 4.0 International
and Contributors: Anthony Bretaudeau
7 materials found
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e-learning
Advanced CLI in Galaxy
•• intermediateSoftware engineering Foundations of Data Science bash jupyter-notebook -
e-learning
Introduction to SQL
• beginnerSoftware engineering Foundations of Data Science SQL jupyter-notebook -
e-learning
Identification of AMR genes in an assembled bacterial genome
• beginnerGenomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod … -
e-learning
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy … -
e-learning
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
e-learning
CLI basics
• beginnerSoftware engineering Foundations of Data Science bash jupyter-notebook -
e-learning
Make & Snakemake
•• intermediateSoftware engineering Foundations of Data Science