Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Antimicrobial stewardship3
    • De novo genome sequencing3
    • Epidemiology3
    • Exomes3
    • Genome annotation3
    • Genome sequencing3
    • Genomes3
    • Genomics3
    • Medical microbiology3
    • Microbial genetics3
    • Microbial physiology3
    • Microbial surveillance3
    • Microbiological surveillance3
    • Microbiology3
    • Molecular infection biology3
    • Molecular microbiology3
    • Personal genomics3
    • Public health3
    • Public health and epidemiology3
    • Synthetic genomics3
    • Viral genomics3
    • WGS3
    • Whole genome resequencing3
    • Whole genome sequencing3
    • Whole genomes3
    • AMR2
    • Antibiotic resistance (ABR)2
    • Antifungal resistance2
    • Antimicrobial resistance2
    • Antiprotozoal resistance2
    • Antiviral resistance2
    • Assembly2
    • Extensive drug resistance (XDR)2
    • Multidrug resistance2
    • Multiple drug resistance (MDR)2
    • Multiresistance2
    • Pandrug resistance (PDR)2
    • Sequence assembly2
    • Total drug resistance (TDR)2
    • Biological sequences1
    • Communicable disease1
    • Infectious disease1
    • Sequence analysis1
    • Sequence databases1
    • Transmissible disease1
    • Show N_FILTERS more
    • Tool
    • Galaxy3
    • Bandage2
    • FastQC2
    • QUAST2
    • fastp2
    • Bakta1
    • Bowtie 21
    • Bwa-mem21
    • Falco1
    • Filtlong1
    • Flye1
    • JBrowse1
    • NanoPlot1
    • Polypolish1
    • shovill1
    • staramr1
    • tbl2gff31
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training3
    • Show N_FILTERS more
    • Keyword
    • microgalaxy3
    • Assembly2
    • amr2
    • assembly2
    • illumina2
    • Genome Annotation1
    • gmod1
    • jbrowse11
    • nanopore1
    • one-health1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Bazante Sanders
    • Bérénice Batut32
    • Saskia Hiltemann20
    • Helena Rasche14
    • Subina Mehta14
    • Anthony Bretaudeau13
    • Mehmet Tekman12
    • Yvan Le Bras12
    • Björn Grüning11
    • Maria Doyle11
    • Anton Nekrutenko10
    • Simon Bray10
    • Wendi Bacon10
    • Pavankumar Videm9
    • Pratik Jagtap9
    • Wolfgang Maier9
    • Anne Fouilloux8
    • Cristóbal Gallardo8
    • Marie Josse8
    • Daniel Blankenberg7
    • Nicola Soranzo7
    • Stéphanie Robin7
    • Alexandre Cormier6
    • Anika Erxleben6
    • Anna Syme6
    • Dave Clements6
    • Erwan Corre6
    • Florian Christoph Sigloch6
    • Julia Jakiela6
    • Kaivan Kamali6
    • Laura Leroi6
    • Simon Gladman6
    • Timothy J. Griffin6
    • Anup Kumar5
    • Dechen Bhuming5
    • Delphine Lariviere5
    • James Johnson5
    • Joachim Wolff5
    • Katherine Do5
    • Lucille Delisle5
    • Melanie Föll5
    • Praveen Kumar5
    • Ray Sajulga5
    • Alex Ostrovsky4
    • Beatriz Serrano-Solano4
    • Christopher Barnett4
    • Clemens Blank4
    • Coline Royaux4
    • Emma Leith4
    • Florian Heyl4
    • Katarzyna Kamieniecka4
    • Krzysztof Poterlowicz4
    • Mallory Freeberg4
    • Marius van den Beek4
    • Vivek Bhardwaj4
    • Belinda Phipson3
    • Engy Nasr3
    • Fidel Ramirez3
    • Khaled Jum'ah3
    • Leonid Kostrykin3
    • Matthias Fahrner3
    • Mo Heydarian3
    • Paul Zierep3
    • Tharindu Senapathi3
    • Alireza Khanteymoori2
    • Anne Pajon2
    • Chao Zhang2
    • Christoph Stritt2
    • Daniela Brites2
    • Diana Chiang Jurado2
    • Elisa Michon2
    • Esteban Perez-Wohlfeil2
    • Friederike Dündar2
    • Galo A. Goig2
    • Guillaume Gricourt2
    • Hans-Rudolf Hotz2
    • Harriet Dashnow2
    • Ioana Popescu2
    • Jayadev Joshi2
    • Jean-Karim Hériché2
    • Jean-Loup Faulon2
    • Joan Hérisson2
    • Kenza Bazi-Kabbaj2
    • Leily Rabbani2
    • Marisa Loach2
    • Mateo Boudet2
    • Miguel Roncoroni2
    • Morgan Howells2
    • Nadia Goué2
    • Nathan Dunn2
    • Olivier Norvez2
    • Peter van Heusden2
    • Polina Polunina2
    • Ryan Abernathey2
    • Simon Benateau2
    • Thomas Duigou2
    • Thomas Wollmann2
    • Torsten Seemann2
    • Ahmed Hamid Awan1
    • Allison Creason1
    • Show N_FILTERS more
    • Contributor
    • Helena Rasche
    • Anthony Bretaudeau3
    • Bazante Sanders3
    • Björn Grüning3
    • Bérénice Batut3
    • Miaomiao Zhou3
    • Saskia Hiltemann3
    • Cristóbal Gallardo2
    • Deepti Varshney2
    • pimarin2
    • Matúš Kalaš1
    • Nate Coraor1
    • Teresa Müller1
    • Verena Moosmann1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows
    • Jupyter Notebook (with Solutions)14
    • Jupyter Notebook (without Solutions)14
    • Associated Training Datasets4
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Authors: Bazante Sanders

and Contributors: Helena Rasche

and Related resources: Associated Workflows

3 materials found
  • e-learning

    Identification of AMR genes in an assembled bacterial genome

    • beginner
    Genomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod …
  • e-learning

    Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

    • beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy …
  • e-learning

    Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

    • beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.