Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Antimicrobial stewardship3
    • De novo genome sequencing3
    • Epidemiology3
    • Exomes3
    • Genome annotation3
    • Genome sequencing3
    • Genomes3
    • Genomics3
    • Medical microbiology3
    • Microbial genetics3
    • Microbial physiology3
    • Microbial surveillance3
    • Microbiological surveillance3
    • Microbiology3
    • Molecular infection biology3
    • Molecular microbiology3
    • Personal genomics3
    • Public health3
    • Public health and epidemiology3
    • Synthetic genomics3
    • Viral genomics3
    • WGS3
    • Whole genome resequencing3
    • Whole genome sequencing3
    • Whole genomes3
    • AMR2
    • Antibiotic resistance (ABR)2
    • Antifungal resistance2
    • Antimicrobial resistance2
    • Antiprotozoal resistance2
    • Antiviral resistance2
    • Assembly2
    • Extensive drug resistance (XDR)2
    • Multidrug resistance2
    • Multiple drug resistance (MDR)2
    • Multiresistance2
    • Pandrug resistance (PDR)2
    • Sequence assembly2
    • Total drug resistance (TDR)2
    • Biological sequences1
    • Communicable disease1
    • Infectious disease1
    • Sequence analysis1
    • Sequence databases1
    • Transmissible disease1
    • Show N_FILTERS more
    • Tool
    • Galaxy
    • Bandage2
    • FastQC2
    • QUAST2
    • fastp2
    • Bakta1
    • Bowtie 21
    • Bwa-mem21
    • Falco1
    • Filtlong1
    • Flye1
    • JBrowse1
    • NanoPlot1
    • Polypolish1
    • shovill1
    • staramr1
    • tbl2gff31
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training3
    • Show N_FILTERS more
    • Keyword
    • microgalaxy3
    • Assembly2
    • amr2
    • assembly2
    • illumina2
    • Genome Annotation1
    • gmod1
    • jbrowse11
    • nanopore1
    • one-health1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Bazante Sanders
    • Bérénice Batut46
    • Subina Mehta24
    • Saskia Hiltemann23
    • Yvan Le Bras20
    • Helena Rasche18
    • Anthony Bretaudeau16
    • Anne Fouilloux13
    • Anton Nekrutenko13
    • James Johnson13
    • Katherine Do13
    • Marie Josse13
    • Wolfgang Maier13
    • Maria Doyle12
    • Mehmet Tekman12
    • Anup Kumar11
    • Cristóbal Gallardo11
    • Pratik Jagtap11
    • Björn Grüning10
    • Delphine Lariviere10
    • Melanie Föll10
    • Pavankumar Videm10
    • Wendi Bacon10
    • Simon Bray9
    • Simon Gladman8
    • Timothy J. Griffin8
    • Daniel Blankenberg7
    • Erwan Corre7
    • Julia Jakiela7
    • Kaivan Kamali7
    • Matthias Fahrner7
    • Nicola Soranzo7
    • Praveen Kumar7
    • Stéphanie Robin7
    • Alexandre Cormier6
    • Anika Erxleben6
    • Anna Syme6
    • Coline Royaux6
    • Dave Clements6
    • Emma Leith6
    • Laura Leroi6
    • Valentin Loux6
    • Alex Ostrovsky5
    • Beatriz Serrano-Solano5
    • Dechen Bhuming5
    • Florian Christoph Sigloch5
    • Fotis E. Psomopoulos5
    • Joachim Wolff5
    • Katarzyna Kamieniecka5
    • Krzysztof Poterlowicz5
    • Leonid Kostrykin5
    • Lucille Delisle5
    • Paul Zierep5
    • Ray Sajulga5
    • Alireza Khanteymoori4
    • Clemens Blank4
    • Diana Chiang Jurado4
    • Florian Heyl4
    • Helge Hecht4
    • Hélène Chiapello4
    • Khaled Jum'ah4
    • Mallory Freeberg4
    • Marius van den Beek4
    • Mélanie Petera4
    • Nadia Goué4
    • Riccardo Massei4
    • Vivek Bhardwaj4
    • Belinda Phipson3
    • Christopher Barnett3
    • Engy Nasr3
    • Fidel Ramirez3
    • Gildas Le Corguillé3
    • Jean-François Martin3
    • Marie Crane3
    • Marisa Loach3
    • Miguel Roncoroni3
    • Mo Heydarian3
    • Morgan Howells3
    • Toby Hodges3
    • Workflow4Metabolomics core team3
    • Anne Pajon2
    • Brandon Pickett2
    • Chao Zhang2
    • Christoph Stritt2
    • Clea Siguret2
    • Daniela Brites2
    • David Christiany2
    • Deepti Varshney2
    • Ekaterina Polkh2
    • Elisa Michon2
    • Esteban Perez-Wohlfeil2
    • Fabio Cumbo2
    • Florence Combes2
    • Friederike Dündar2
    • Galo A. Goig2
    • Hans-Rudolf Hotz2
    • Harriet Dashnow2
    • Jayadev Joshi2
    • Jean-Karim Hériché2
    • Jon Trow2
    • Show N_FILTERS more
    • Contributor
    • Anthony Bretaudeau3
    • Bazante Sanders3
    • Björn Grüning3
    • Bérénice Batut3
    • Helena Rasche3
    • Miaomiao Zhou3
    • Saskia Hiltemann3
    • Cristóbal Gallardo2
    • Deepti Varshney2
    • pimarin2
    • Matúš Kalaš1
    • Nate Coraor1
    • Teresa Müller1
    • Verena Moosmann1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets3
    • Associated Workflows3
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: Galaxy

and Authors: Bazante Sanders

3 materials found
  • e-learning

    Identification of AMR genes in an assembled bacterial genome

    • beginner
    Genomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod …
  • e-learning

    Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

    • beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy …
  • e-learning

    Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

    • beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.