Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Algorithms10
    • Computer programming10
    • Data structures10
    • Programming languages10
    • Software development10
    • Software engineering10
    • Biological sequences8
    • Community analysis8
    • Environmental microbiology8
    • Metagenomics8
    • Microbial ecology8
    • Microbiome8
    • Molecular community analysis8
    • Sequence analysis8
    • Sequence databases8
    • Shotgun metagenomics8
    • Taxonomy5
    • DNA metabarcoding3
    • Environmental metabarcoding3
    • Metabarcoding3
    • RNA metabarcoding3
    • eDNA metabarcoding3
    • eRNA metabarcoding3
    • Function analysis2
    • Functional analysis2
    • Metatranscriptomics2
    • Protein function analysis2
    • Protein function prediction2
    • AMR1
    • Antibiotic resistance (ABR)1
    • Antifungal resistance1
    • Antimicrobial resistance1
    • Antimicrobial stewardship1
    • Antiprotozoal resistance1
    • Antiviral resistance1
    • Assembly1
    • Communicable disease1
    • Comparative transcriptomics1
    • DNA variation1
    • Diffraction experiment1
    • Epidemiology1
    • Extensive drug resistance (XDR)1
    • Genetic variation1
    • Genomic variation1
    • Imaging1
    • Infectious disease1
    • Medical microbiology1
    • Metagenomic sequencing1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Microscopy1
    • Microscopy imaging1
    • Molecular infection biology1
    • Molecular microbiology1
    • Multidrug resistance1
    • Multiple drug resistance (MDR)1
    • Multiresistance1
    • Mutation1
    • Optical super resolution microscopy1
    • Pandrug resistance (PDR)1
    • Photonic force microscopy1
    • Photonic microscopy1
    • Polymorphism1
    • Public health1
    • Public health and epidemiology1
    • Sequence assembly1
    • Shotgun metagenomic sequencing1
    • Somatic mutations1
    • Total drug resistance (TDR)1
    • Transcriptome1
    • Transcriptomics1
    • Transmissible disease1
    • Show N_FILTERS more
    • Tool
    • Galaxy23
    • FastQC5
    • taxonomy_krona_chart5
    • Cutadapt4
    • HUMAnN24
    • MetaPhlAn4
    • MultiQC4
    • GraPhlAn3
    • SortMeRNA3
    • export2graphlan3
    • humann3
    • mothur3
    • Galactic Circos2
    • Newick Utilities2
    • ggplot22
    • BCFtools1
    • BEDTools1
    • BamTools1
    • EGA1
    • FASTX-Toolkit1
    • FeatureCounts1
    • GEMINI1
    • GOseq1
    • Galaxy Image Analysis1
    • HISAT21
    • JBrowse1
    • Krona1
    • MAFFT1
    • NanoPlot1
    • RSeQC1
    • Racon1
    • SAMtools1
    • SPAdes1
    • SRA Software Toolkit1
    • Unicycler1
    • VelvetOptimiser1
    • annotatemyids1
    • ete1
    • iqtree1
    • limma1
    • miniasm1
    • scikit-image1
    • seqtk1
    • staramr1
    • trimAl1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training54
    • Show N_FILTERS more
    • Keyword
    • Contributing to the Galaxy Training Material8
    • Microbiome8
    • Development in Galaxy6
    • microgalaxy6
    • Galaxy Server administration5
    • Visualisation5
    • cyoa5
    • Foundations of Data Science4
    • Introduction to Galaxy Analyses4
    • Teaching and Hosting Galaxy training3
    • ansible3
    • 16S2
    • Sequence analysis2
    • Using Galaxy and Managing your Data2
    • git-gat2
    • metabarcoding2
    • metatranscriptomics2
    • plants2
    • Assembly1
    • Choose your own Adventure1
    • CodeSpaces1
    • Command-line1
    • FAIR Data1
    • FAIR Data, Workflows, and Research1
    • Galaxy Community Building1
    • GitPod1
    • HeLa1
    • Imaging1
    • Transcriptomics1
    • Variant Analysis1
    • Workflows1
    • amr1
    • and Research1
    • assembly1
    • bulk1
    • data stewardship1
    • fair1
    • gmod1
    • jbrowse11
    • jobs1
    • json1
    • jupyter-notebook1
    • nanopore1
    • plasmids1
    • rna-seq1
    • sql1
    • storage1
    • training1
    • viz1
    • workflows1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner49
    • Intermediate5
    • Advanced1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International54
    • License Not Specified1
    • Show N_FILTERS more
    • Target audience
    • Students31
    • Instructors12
    • Galaxy Administrators11
    • Show N_FILTERS more
    • Author
    • Saskia Hiltemann
    • Helena Rasche113
    • SIB Swiss Institute of Bioinformatics102
    • Bérénice Batut90
    • Björn Grüning38
    • Anton Nekrutenko27
    • bebatut27
    • Anthony Bretaudeau26
    • bgruening25
    • Subina Mehta24
    • The Carpentries23
    • Yvan Le Bras22
    • Fotis E. Psomopoulos21
    • Michelle Brazas21
    • Simon Gladman21
    • Nicola Soranzo20
    • Wandrille Duchemin20
    • Nate Coraor19
    • Bazante Sanders18
    • Katarzyna Kamieniecka18
    • Krzysztof Poterlowicz18
    • Terri Attwood18
    • Wendi Bacon18
    • Marie Josse17
    • The Gulbenkian Training Programme in Bioinformatics17
    • Anne Fouilloux16
    • Mehmet Tekman15
    • Maria Doyle14
    • Martin Morgan14
    • Donny Vrins13
    • Geert van Geest13
    • James Johnson13
    • Julia Jakiela13
    • Katherine Do13
    • Patricia Palagi13
    • Wolfgang Maier13
    • shiltemann13
    • Cristóbal Gallardo12
    • Egon Willighagen12
    • Simon Andrews12
    • Simon Bray12
    • nekrut12
    • Anup Kumar11
    • Celia van Gelder11
    • Delphine Lariviere11
    • Khaled Jum'ah11
    • Mathieu Bourgey11
    • Melanie Föll11
    • Pratik Jagtap11
    • Dave Clements10
    • Lucille Delisle10
    • Mijke Jetten10
    • Paul Yorke10
    • Pavankumar Videm10
    • Daniel Blankenberg9
    • David Wishart9
    • Jared Simpson9
    • John Chilton9
    • Marius van den Beek9
    • allegra.via Via9
    • Allegra Via8
    • Anika Erxleben8
    • Avans Hogeschool8
    • Boris Steipe8
    • Elisabeth Gasteiger8
    • Helen Brown8
    • Malachi Griffith8
    • Maria Levchenko8
    • Matthias Fahrner8
    • Paul Zierep8
    • Robin Engler8
    • Stéphanie Robin8
    • Timothy J. Griffin8
    • Alex Ostrovsky7
    • Alexander Botzki7
    • Alexandre Cormier7
    • Anne Pajon7
    • Erwan Corre7
    • Florian Christoph Sigloch7
    • Joachim Wolff7
    • Kaivan Kamali7
    • Korbinian Bösl7
    • Laura Cooper7
    • Laura Leroi7
    • Martin Čech7
    • Michael Charleston7
    • Personalized Health Informatics Group7
    • Praveen Kumar7
    • Robert Andrews7
    • Sergio Martínez Cuesta7
    • pajanne7
    • stortebecker7
    • Andrew Mason6
    • Anna Syme6
    • Branka Franicevic6
    • Christopher Barnett6
    • Coline Royaux6
    • Dayane Araujo6
    • ELIXIR Goblet Train the Trainers6
    • Eija Korpelainen6
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann51
    • Helena Rasche48
    • Björn Grüning37
    • Bérénice Batut29
    • Nicola Soranzo27
    • Niall Beard17
    • Martin Čech15
    • Anthony Bretaudeau14
    • Cristóbal Gallardo13
    • William Durand13
    • Gildas Le Corguillé9
    • Armin Dadras6
    • Nate Coraor6
    • Simon Gladman6
    • Wendi Bacon6
    • Marius van den Beek5
    • Wolfgang Maier5
    • David López4
    • Lucille Delisle4
    • Teresa Müller4
    • Dave Clements3
    • Simon Bray3
    • Anne Fouilloux2
    • Beatriz Serrano-Solano2
    • Bert Droesbeke2
    • Dannon Baker2
    • Engy Nasr2
    • Gianmauro Cuccuru2
    • Jennifer Hillman-Jackson2
    • Maria Doyle2
    • Matthias Bernt2
    • Mehmet Tekman2
    • Michele Maroni2
    • Mira Kuntz2
    • Nadia Goué2
    • Paul Zierep2
    • Alex Ostrovsky1
    • Andrea Bagnacani1
    • Anton Nekrutenko1
    • Anup Kumar1
    • Aysam Guerler1
    • Fotis E. Psomopoulos1
    • Jasper Ouwerkerk1
    • John Chilton1
    • John Davis1
    • José Manuel Domínguez1
    • Leonid Kostrykin1
    • Linelle Abueg1
    • Marie Josse1
    • Matti Hoch1
    • Mélanie Petera1
    • Peter van Heusden1
    • Sanjay Kumar Srikakulam1
    • Scott Cain1
    • Sofoklis Keisaris1
    • Stéphanie Robin1
    • Subina Mehta1
    • Thomas Wollmann1
    • Vlad Visan1
    • Willem de Koning1
    • Youri Hoogstrate1
    • Yvan Le Bras1
    • mmiladi1
    • Show N_FILTERS more
    • Resource type
    • e-learning37
    • slides17
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets28
    • Quarto/RMarkdown Notebook24
    • Associated Workflows21
    • ansible3
    • git-gat2
    • Jupyter Notebook (with Solutions)1
    • Jupyter Notebook (without Solutions)1
    • jobs1
    • storage1
    • training1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Authors: Saskia Hiltemann

55 materials found
  • e-learning

    Identification and Evolutionary Analysis of Transcription-Associated Proteins in Streptophyte algae and Land plants

    • beginner
    Sequence analysis plants
  • e-learning

    Preview the GTN website as you edit your training material

    • beginner
    Choose your own Adventure CodeSpaces Command-line Contributing to the Galaxy Training Material GitPod
  • e-learning

    Creating community content

    • beginner
    Galaxy Community Building
  • e-learning

    Running the GTN website online using GitHub CodeSpaces

    • beginner
    Contributing to the Galaxy Training Material
  • slides

    Intro to DataPLANT ARCs

    • beginner
    FAIR Data Workflows and Research
  • e-learning

    DataPLANT ARCs

    • beginner
    FAIR Data, Workflows, and Research data stewardship fair plants
  • e-learning

    Workflow Reports

    •• intermediate
    Using Galaxy and Managing your Data workflows
  • e-learning

    Pathway analysis with the MINERVA Platform

    •• intermediate
    Transcriptomics bulk cyoa rna-seq viz
  • e-learning

    Introduction to Image Analysis using Galaxy

    • beginner
    Imaging HeLa
  • e-learning

    Genomic Data Visualisation with JBrowse

    •• intermediate
    Visualisation gmod jbrowse1
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.