Materials - TeSS Sandbox (Training eSupport System)

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Keywords: 10x

and Content provider: Galaxy Training

and Licence: Creative Commons Attribution 4.0 International

16 materials found

e-learning

Single-cell ATAC-seq standard processing with SnapATAC2

•• intermediate
10x Single Cell epigenetics single-cell
e-learning

Pre-processing of 10X Single-Cell ATAC-seq Datasets

• beginner
10x Single Cell epigenetics
e-learning

Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)

• beginner
10x MIGHTS Python Single Cell jupyter-notebook paper-replication
e-learning

Removing the effects of the cell cycle

• beginner
10x Single Cell
e-learning

Generating a single cell matrix using Alevin and combining datasets (bash + R)

• beginner
10x MIGHTS Single Cell jupyter-notebook paper-replication
e-learning

Inferring single cell trajectories with Scanpy

• beginner
10x MIGHTS Single Cell paper-replication
e-learning

Filter, plot, and explore single cell RNA-seq data with Seurat

• beginner
10x MIGHTS Single Cell paper-replication
e-learning

Generating a single cell matrix using Alevin

• beginner
10x MIGHTS Single Cell paper-replication
e-learning

Combining single cell datasets after pre-processing

• beginner
10x MIGHTS Single Cell paper-replication
e-learning

Filter, plot and explore single-cell RNA-seq data with Scanpy

• beginner
10x MIGHTS Single Cell paper-replication

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