Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Algorithms66
    • Computer programming66
    • Data structures66
    • Programming languages66
    • Software development66
    • Software engineering66
    • Exomes43
    • Genome annotation43
    • Genomes43
    • Genomics43
    • Personal genomics43
    • Synthetic genomics43
    • Viral genomics43
    • Whole genomes43
    • Bottom-up proteomics41
    • Discovery proteomics41
    • MS-based targeted proteomics41
    • MS-based untargeted proteomics41
    • Metaproteomics41
    • Peptide identification41
    • Protein and peptide identification41
    • Proteomics41
    • Quantitative proteomics41
    • Targeted proteomics41
    • Top-down proteomics41
    • Bayesian methods33
    • Biological sequences33
    • Biostatistics33
    • Descriptive statistics33
    • Gaussian processes33
    • Inferential statistics33
    • Markov processes33
    • Multivariate statistics33
    • Probabilistic graphical model33
    • Probability33
    • Sequence analysis33
    • Sequence databases33
    • Statistics33
    • Statistics and probability33
    • Computational ecology27
    • Ecoinformatics27
    • Ecological informatics27
    • Ecology27
    • Ecosystem science27
    • Assembly24
    • Community analysis24
    • Comparative transcriptomics24
    • Environmental microbiology24
    • Microbial ecology24
    • Microbiome24
    • Molecular community analysis24
    • Sequence assembly24
    • Transcriptome24
    • Transcriptomics24
    • Antimicrobial stewardship22
    • Medical microbiology22
    • Metagenomics22
    • Microbial genetics22
    • Microbial physiology22
    • Microbial surveillance22
    • Microbiological surveillance22
    • Microbiology22
    • Molecular infection biology22
    • Molecular microbiology22
    • Shotgun metagenomics22
    • DNA variation17
    • Genetic variation17
    • Genomic variation17
    • Mutation17
    • Polymorphism17
    • Somatic mutations17
    • Taxonomy17
    • Diffraction experiment15
    • Imaging15
    • Microscopy15
    • Microscopy imaging15
    • Optical super resolution microscopy15
    • Photonic force microscopy15
    • Photonic microscopy15
    • Biodiversity12
    • Computational chemistry9
    • Exometabolomics9
    • LC-MS-based metabolomics9
    • MS-based metabolomics9
    • MS-based targeted metabolomics9
    • MS-based untargeted metabolomics9
    • Mass spectrometry-based metabolomics9
    • Metabolites9
    • Metabolome9
    • Metabolomics9
    • Metabonomics9
    • NMR-based metabolomics9
    • Epigenomics8
    • DNA metabarcoding7
    • Environmental metabarcoding7
    • Metabarcoding7
    • RNA metabarcoding7
    • eDNA metabarcoding7
    • eRNA metabarcoding7
    • De novo genome sequencing6
    • Show N_FILTERS more
    • Tool
    • Galaxy306
    • FastQC27
    • SAMtools23
    • MultiQC21
    • BWA19
    • fastp17
    • BEDTools14
    • SCANPY14
    • JBrowse12
    • BLAST11
    • Cutadapt11
    • scikit-learn11
    • DeepTools10
    • Falco10
    • ggplot210
    • BUSCO9
    • FreeBayes9
    • QUAST9
    • STAR9
    • Trimmomatic9
    • scikit-image9
    • taxonomy_krona_chart9
    • GEMINI8
    • Galaxy Image Analysis8
    • kraken28
    • BCFtools7
    • HISAT27
    • NanoPlot7
    • msConvert7
    • BamTools6
    • Bandage6
    • Biopython6
    • FASTX-Toolkit6
    • MAFFT6
    • MaxQuant6
    • Open Babel6
    • RStudio6
    • seqtk6
    • Bowtie 25
    • Flye5
    • Minimap25
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • Workflow4Metabolomics5
    • annotatemyids5
    • compute_sequence_length5
    • gffread5
    • Bwa-mem24
    • Diamond4
    • GOseq4
    • Galactic Circos4
    • KrakenTools4
    • MSstats4
    • MetaPhlAn4
    • Newick Utilities4
    • RSeQC4
    • SRA Software Toolkit4
    • StringTie4
    • The Protein Data Bank (PDB)4
    • Trim Galore4
    • UniProt4
    • anndata4
    • bx-python4
    • gffcompare4
    • mothur4
    • xcms4
    • Bracken3
    • Cardinal3
    • DESeq23
    • DropletUtils3
    • FastTree3
    • GenomeScope 2.03
    • InterProScan (EBI)3
    • MACS3
    • Merqury3
    • OMArk3
    • QualiMap3
    • RDKit3
    • Salmon3
    • Stacks3
    • Unicycler3
    • Unipept3
    • Vcflib3
    • bed to protein map3
    • customProDB3
    • gfastats3
    • iqtree3
    • lofreq3
    • pyGenomeTracks3
    • snippy3
    • snpEff3
    • Apollo2
    • Bakta2
    • Bio3D2
    • COMBAT-TB Workbench2
    • CellProfiler2
    • ChEMBL2
    • CheckM2
    • Circos2
    • Clustal 1.8 (Clustal W, Clustal X)2
    • FeatureCounts2
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training
    • European Bioinformatics Institute (EBI)105
    • Barcelona Supercomputing Center (BSC)4
    • ELIXIR Brazil4
    • Swiss Institute of Bioinformatics3
    • VIB Bioinformatics Core2
    • Coursera1
    • DTLS - Dutch Techcentre For Life Sciences1
    • Future Learn1
    • Test Provider1
    • Show N_FILTERS more
    • Keyword
    • jupyter-notebook55
    • Foundations of Data Science48
    • Proteomics41
    • biodiversity41
    • Galaxy Server administration39
    • microgalaxy39
    • Single Cell34
    • Statistics and machine learning32
    • Ecology27
    • Genome Annotation24
    • Transcriptomics24
    • Contributing to the Galaxy Training Material23
    • Using Galaxy and Managing your Data23
    • Microbiome20
    • FAIR Data, Workflows, and Research19
    • ansible19
    • git-gat18
    • interactive-tools18
    • Variant Analysis17
    • work-in-progress17
    • Assembly16
    • elixir16
    • jbrowse116
    • Development in Galaxy15
    • Imaging15
    • Teaching and Hosting Galaxy training15
    • fair15
    • earth-system14
    • gmod14
    • Climate13
    • paper-replication12
    • prokaryote12
    • Introduction to Galaxy Analyses11
    • MIGHTS11
    • cyoa11
    • Sequence analysis10
    • ai-ml10
    • data stewardship10
    • eukaryote10
    • label-free10
    • plants10
    • DDA9
    • Metabolomics9
    • covid199
    • ocean9
    • one-health9
    • Computational chemistry8
    • Epigenetics8
    • Galaxy Community Building8
    • assembly8
    • data management8
    • workflows8
    • 10x7
    • EBV dataset7
    • EBV workflow7
    • bioimaging7
    • collections7
    • dmp7
    • metagenomics7
    • R6
    • nanopore6
    • rmarkdown-notebook6
    • train-the-trainers6
    • transcriptomics6
    • 16S5
    • Large Language Model5
    • SQL5
    • deploying5
    • illumina5
    • jobs5
    • label-TMT115
    • metabarcoding5
    • mouse5
    • ro-crate5
    • virology5
    • Community4
    • DIA4
    • Evolution4
    • FAIR4
    • Genetic composition EBV class4
    • HeLa4
    • QC4
    • SIG4
    • bacteria4
    • diversity4
    • pangeo4
    • storage4
    • taxonomic profiling4
    • ChIP-seq3
    • Digital Humanities3
    • RAD-seq3
    • Synthetic Biology3
    • Visualisation3
    • amr3
    • apollo23
    • bash3
    • bulk3
    • data import3
    • ecology3
    • epigenetics3
    • Show N_FILTERS more
    • Difficulty level
    • Beginner406
    • Intermediate93
    • Advanced15
    • Not specified3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International514
    • License Not Specified3
    • Show N_FILTERS more
    • Target audience
    • Students414
    • Galaxy Administrators54
    • Instructors46
    • Show N_FILTERS more
    • Author
    • Helena Rasche93
    • Bérénice Batut79
    • Saskia Hiltemann37
    • Björn Grüning28
    • Anton Nekrutenko25
    • Subina Mehta23
    • The Carpentries23
    • Fotis E. Psomopoulos21
    • Yvan Le Bras21
    • Bazante Sanders18
    • Marie Josse18
    • Wendi Bacon18
    • Katarzyna Kamieniecka17
    • Krzysztof Poterlowicz17
    • Anthony Bretaudeau16
    • Nicola Soranzo14
    • Simon Gladman14
    • Donny Vrins13
    • James Johnson13
    • Katherine Do13
    • Wolfgang Maier13
    • Anne Fouilloux12
    • Julia Jakiela12
    • Mehmet Tekman12
    • Simon Bray12
    • Khaled Jum'ah11
    • Maria Doyle11
    • Cristóbal Gallardo10
    • Delphine Lariviere10
    • Melanie Föll10
    • Paul Zierep10
    • Pavankumar Videm10
    • Pratik Jagtap10
    • Anup Kumar9
    • Marius van den Beek9
    • Avans Hogeschool8
    • Nate Coraor8
    • Timothy J. Griffin8
    • Anika Erxleben7
    • Daniel Blankenberg7
    • Dave Clements7
    • Florian Christoph Sigloch7
    • Laura Cooper7
    • Lucille Delisle7
    • Matthias Fahrner7
    • Praveen Kumar7
    • Robert Andrews7
    • Allegra Via6
    • Andrew Mason6
    • Anna Syme6
    • Branka Franicevic6
    • Coline Royaux6
    • Diana Chiang Jurado6
    • ELIXIR Goblet Train the Trainers6
    • Emma Leith6
    • Patricia Palagi6
    • Philippe Rocca-Serra6
    • Raphael Mourad6
    • Sara Morsy6
    • Valentin Loux6
    • Xenia Perez Sitja6
    • Alex Ostrovsky5
    • Christopher Barnett5
    • Clemens Blank5
    • Dechen Bhuming5
    • Erwan Corre5
    • Joachim Wolff5
    • John Chilton5
    • John Davis5
    • Kellie Snow5
    • Korneel Hens5
    • Leonid Kostrykin5
    • Munazah Andrabi5
    • Nadia Goué5
    • Nick Juty5
    • Ray Sajulga5
    • Saskia Lawson-Tovey5
    • Solenne Correard5
    • Stéphanie Robin5
    • Alexandre Cormier4
    • Alireza Khanteymoori4
    • Amirhossein Naghsh Nilchi4
    • Anne Pajon4
    • Beatriz Serrano-Solano4
    • Helge Hecht4
    • Hélène Chiapello4
    • Kaivan Kamali4
    • Keiler Collier4
    • Laura Leroi4
    • Mallory Freeberg4
    • Mira Kuntz4
    • Morgan Howells4
    • Riccardo Massei4
    • Simone Leo4
    • Vivek Bhardwaj4
    • Belinda Phipson3
    • Daniela Schneider3
    • Enis Afgan3
    • Fabio Cumbo3
    • Fidel Ramirez3
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann448
    • Helena Rasche391
    • Björn Grüning335
    • Bérénice Batut199
    • Nicola Soranzo109
    • Martin Čech89
    • Anthony Bretaudeau85
    • Niall Beard65
    • Wendi Bacon63
    • Armin Dadras57
    • Marius van den Beek54
    • Nate Coraor51
    • Cristóbal Gallardo49
    • Gildas Le Corguillé48
    • Teresa Müller41
    • William Durand38
    • Lucille Delisle37
    • Mehmet Tekman37
    • Pavankumar Videm37
    • Wolfgang Maier35
    • Simon Gladman34
    • Yvan Le Bras34
    • Melanie Föll31
    • Beatriz Serrano-Solano29
    • Subina Mehta28
    • Simon Bray25
    • Anup Kumar24
    • Donny Vrins24
    • Peter van Heusden23
    • Maria Doyle22
    • Bazante Sanders19
    • Julia Jakiela19
    • Khaled Jum'ah17
    • Anton Nekrutenko16
    • Deepti Varshney16
    • Anne Fouilloux15
    • Marie Josse14
    • Mélanie Petera13
    • Pratik Jagtap13
    • Timothy J. Griffin13
    • Pablo Moreno12
    • Paul Zierep12
    • Delphine Lariviere11
    • Matthias Bernt11
    • Mira Kuntz11
    • Leonid Kostrykin10
    • David López9
    • Gianmauro Cuccuru9
    • Katarzyna Kamieniecka9
    • Marisa Loach9
    • Stéphanie Robin9
    • Amirhossein Naghsh Nilchi8
    • Verena Moosmann8
    • Daniela Schneider7
    • Katherine Do7
    • Mallory Freeberg7
    • Anna Syme6
    • Bert Droesbeke6
    • Christopher Barnett6
    • Clemens Blank6
    • Diana Chiang Jurado6
    • Enis Afgan6
    • Florian Christoph Sigloch6
    • Hans-Rudolf Hotz6
    • Linelle Abueg6
    • Morgan Howells6
    • Alireza Khanteymoori5
    • Clea Siguret5
    • Dave Clements5
    • Ekaterina Polkh5
    • Florian Heyl5
    • John Chilton5
    • John Davis5
    • Kaivan Kamali5
    • Solenne Correard5
    • Wandrille Duchemin5
    • olisand5
    • Alexandre Cormier4
    • Coline Royaux4
    • Eli Chadwick4
    • Fotis E. Psomopoulos4
    • Tomas Klingström4
    • Alex Ostrovsky3
    • Catherine Bromhead3
    • Engy Nasr3
    • Fabio Cumbo3
    • Jasper Ouwerkerk3
    • Keiler Collier3
    • Krzysztof Poterlowicz3
    • Maria Christina Maniou3
    • Mateusz Kuzak3
    • Miaomiao Zhou3
    • Nuwan Goonasekera3
    • Phil Reed3
    • Riccardo Massei3
    • Sofoklis Keisaris3
    • Timon Schlegel3
    • Ahmed Hamid Awan2
    • Andrea Bagnacani2
    • Anika Erxleben2
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • slides99
    • Tutorial64
    • Slides13
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets319
    • Associated Workflows263
    • Quarto/RMarkdown Notebook121
    • Jupyter Notebook (with Solutions)50
    • Jupyter Notebook (without Solutions)50
    • ansible19
    • git-gat18
    • jobs5
    • deploying3
    • monitoring3
    • ro-crate3
    • collections2
    • cyoa2
    • kubernetes2
    • networking2
    • storage2
    • training2
    • wireguard2
    • workflows2
    • Community1
    • DDA1
    • ENA1
    • FAIR1
    • SIG1
    • apollo21
    • authentication1
    • automation1
    • beacon1
    • broken1
    • cloud1
    • data1
    • fair1
    • features1
    • ga4gh1
    • gmod1
    • gtn1
    • interactive-tools1
    • systemd1
    • tags1
    • terraform1
    • tools1
    • work-in-progress1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Content provider: Galaxy Training

and Resource type: e-learning

517 materials found
  • e-learning

    Multiomics data analysis using MultiGSEA

    • beginner
    Proteomics metabolomics multi-omics proteomics transcriptomics
  • e-learning

    Multi-sample batch correction with Harmony and SnapATAC2

    •• intermediate
    10x Single Cell epigenetics
  • e-learning

    Text-Mining Differences in Chinese Newspaper Articles

    •• intermediate
    Statistics and probability Digital Humanities text mining
  • e-learning

    Deciphering Virus Populations - Single Nucleotide Variants (SNVs) and Specificities in Baculovirus Isolates

    •• intermediate
    Genetic variation Variant Analysis
  • e-learning

    Pseudobulk Analysis with Decoupler and EdgeR

    • beginner
    Single Cell pseudobulk transcriptomics
  • e-learning

    Neoantigen 1b: Non-Reference-Database-Generation

    • beginner
    Proteomics label-free
  • e-learning

    Single Cell Proteomics data analysis with bioconductor-scp

    • beginner
    Proteomics
  • e-learning

    Evaluating Reference Data for Bulk RNA Deconvolution

    • beginner
    Single Cell transcriptomics
  • e-learning

    Clustering 3K PBMCs with Seurat

    • beginner
    10x Single Cell
  • e-learning

    Cleaning GBIF data using OpenRefine

    • beginner
    Ecology biodiversity
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 7
  • 8
  • 9
  • 10
  • …
  • 51
  • 52
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.