- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Assembly7
- Biological sequences7
- Sequence analysis7
- Sequence assembly7
- Sequence databases7
- Comparative transcriptomics6
- Metagenomics6
- Shotgun metagenomics6
- Transcriptome6
- Transcriptomics6
- Community analysis5
- Environmental microbiology5
- Microbial ecology5
- Microbiome5
- Molecular community analysis5
- DNA variation4
- Epidemiology4
- Genetic variation4
- Genomic variation4
- Mutation4
- Polymorphism4
- Public health4
- Public health and epidemiology4
- Somatic mutations4
- Taxonomy4
- Antimicrobial stewardship3
- Epigenomics3
- Exomes3
- Genome annotation3
- Genomes3
- Genomics3
- Medical microbiology3
- Microbial genetics3
- Microbial physiology3
- Microbial surveillance3
- Microbiological surveillance3
- Microbiology3
- Molecular infection biology3
- Molecular microbiology3
- Personal genomics3
- Synthetic genomics3
- Viral genomics3
- Whole genomes3
- De novo genome sequencing2
- Function analysis2
- Functional analysis2
- Genome sequencing2
- Metatranscriptomics2
- Protein function analysis2
- Protein function prediction2
- WGS2
- Whole genome resequencing2
- Whole genome sequencing2
- AMR1
- Antibiotic resistance (ABR)1
- Antifungal resistance1
- Antimicrobial resistance1
- Antiprotozoal resistance1
- Antiviral resistance1
- Communicable disease1
- Computational ecology1
- Disease1
- Ecoinformatics1
- Ecological informatics1
- Ecology1
- Ecosystem science1
- Extensive drug resistance (XDR)1
- Infectious disease1
- Multidrug resistance1
- Multiple drug resistance (MDR)1
- Multiresistance1
- Pandrug resistance (PDR)1
- Pathology1
- Total drug resistance (TDR)1
- Transmissible disease1
- Show N_FILTERS more
-
-
-
Tool
- FastQC
- Galaxy248
- SAMtools25
- BWA17
- MultiQC17
- BEDTools16
- fastp14
- Cutadapt13
- JBrowse12
- SCANPY12
- DeepTools11
- QUAST10
- scikit-learn10
- GEMINI8
- NanoPlot8
- STAR8
- taxonomy_krona_chart8
- BUSCO7
- FreeBayes7
- BCFtools6
- Trimmomatic6
- ggplot26
- BLAST5
- BamTools5
- Bandage5
- Bowtie 25
- FASTX-Toolkit5
- Flye5
- HISAT25
- MetaPhlAn5
- Open Babel5
- RSeQC5
- RStudio5
- kraken25
- msConvert5
- seqtk5
- Biopython4
- Galactic Circos4
- HUMAnN24
- MACS4
- MaxQuant4
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC4
- The Protein Data Bank (PDB)4
- UniProt4
- Workflow4Metabolomics4
- annotatemyids4
- gffread4
- mothur4
- snpEff4
- Apollo3
- Clustal 1.8 (Clustal W, Clustal X)3
- Diamond3
- DropletUtils3
- GOseq3
- Galaxy Image Analysis3
- GraPhlAn3
- KrakenTools3
- MAFFT3
- MSstats3
- Merqury3
- Minimap23
- Newick Utilities3
- QualiMap3
- RDKit3
- SeqCode3
- SortMeRNA3
- Stacks3
- Unicycler3
- Unipept3
- bx-python3
- export2graphlan3
- gffcompare3
- humann3
- lofreq3
- pyGenomeTracks3
- scikit-image3
- snippy3
- xcms3
- Bakta2
- Bio3D2
- Bracken2
- Bwa-mem22
- COMBAT-TB Workbench2
- Cardinal2
- CellProfiler2
- ChEMBL2
- ChIPpeakAnno2
- FeatureCounts2
- GECKO2
- GOEnrichment2
- GenomeScope 2.02
- Gromacs2
- Heinz2
- InterProScan (EBI)2
- IsoformSwitchAnalyzeR2
- MAGeCK2
- MDAnalysis2
- MEGAHIT2
- MEME2
- Medaka2
- Show N_FILTERS more
-
-
-
Content provider
- Galaxy Training32
- Show N_FILTERS more
-
-
-
Keyword
- microgalaxy8
- Transcriptomics6
- Assembly5
- Microbiome5
- Variant Analysis4
- assembly4
- Epigenetics3
- Sequence analysis3
- cyoa3
- nanopore3
- Genome Annotation2
- Introduction to Galaxy Analyses2
- QC2
- bulk2
- collections2
- metagenomics2
- metatranscriptomics2
- rna-seq2
- 10x1
- CRISPR1
- ChIP-seq1
- Community composition EBV class1
- EBV dataset1
- EBV workflow1
- Ecology1
- Genetic composition EBV class1
- Heatmap1
- Metabarcoding1
- Nanopore data analysis1
- Pathogens detection1
- Phylogenetic tree1
- Single Cell1
- alternative splicing1
- amr1
- beer1
- cell line1
- citizen science1
- covid191
- drosophila1
- eDNA1
- epigenetics1
- español1
- essential genes1
- genome editing1
- gmod1
- illumina1
- isoform switching1
- jbrowse11
- mouse1
- one-health1
- plants1
- polishing1
- prokaryote1
- tuberculosis1
- viz1
- Show N_FILTERS more
-
-
-
Difficulty level
- Beginner29
- Intermediate2
- Advanced1
- Show N_FILTERS more
-
-
-
Target audience
- Students32
- Show N_FILTERS more
-
-
-
Author
- Bérénice Batut14
- Maria Doyle5
- Saskia Hiltemann5
- Anika Erxleben3
- Engy Nasr3
- Nicola Soranzo3
- Paul Zierep3
- Pavankumar Videm3
- Pratik Jagtap3
- Subina Mehta3
- Alexandre Cormier2
- Anna Syme2
- Anthony Bretaudeau2
- Bazante Sanders2
- Cristóbal Gallardo2
- Emma Leith2
- Erwan Corre2
- Florian Heyl2
- Helena Rasche2
- Laura Leroi2
- Leily Rabbani2
- Lucille Delisle2
- Peter van Heusden2
- Polina Polunina2
- Praveen Kumar2
- Ray Sajulga2
- Simon Gladman2
- Stéphanie Robin2
- Wolfgang Maier2
- Ahmed Hamid Awan1
- Anton Nekrutenko1
- Ava Hoffman1
- Belinda Phipson1
- Björn Grüning1
- Cameron Hyde1
- Clemens Blank1
- Coline Royaux1
- Daniel Maticzka1
- David Salgado1
- Eric Coissac1
- Fidel Ramirez1
- Friederike Dündar1
- Frédéric Boyer1
- Harriet Dashnow1
- Iacopo Cristoferi1
- Katarzyna Kamieniecka1
- Kenji Fujihara1
- Khaled Jum'ah1
- Krzysztof Poterlowicz1
- Mallory Freeberg1
- Marek Ostaszewski1
- Matti Hoch1
- Mo Heydarian1
- Myrthe van Baardwijk1
- Natalie Kucher1
- Nick Stoler1
- Olivier Norvez1
- Robert Meller1
- Siyu Chen1
- Sylvia Mahara1
- Teresa Müller1
- Thoba Lose1
- Torsten Houwaart1
- Twishi Gulati1
- Vivek Bhardwaj1
- Yvan Le Bras1
- Show N_FILTERS more
-
-
-
Contributor
- Helena Rasche
- Saskia Hiltemann29
- Björn Grüning25
- Bérénice Batut22
- Cristóbal Gallardo19
- Nicola Soranzo10
- Anthony Bretaudeau8
- Wolfgang Maier7
- Maria Doyle6
- Niall Beard6
- Lucille Delisle5
- Mehmet Tekman5
- William Durand5
- Florian Heyl4
- Gildas Le Corguillé4
- Pavankumar Videm4
- Teresa Müller4
- Alexandre Cormier3
- Deepti Varshney3
- Mateo Boudet3
- Wendi Bacon3
- Anika Erxleben2
- Anna Syme2
- Anne Fouilloux2
- Anup Kumar2
- Bazante Sanders2
- Beatriz Serrano-Solano2
- Clea Siguret2
- David López2
- Ekaterina Polkh2
- Hans-Rudolf Hotz2
- Joachim Wolff2
- Leily Rabbani2
- Linelle Abueg2
- Marius van den Beek2
- Martin Čech2
- Miaomiao Zhou2
- Natalie Kucher2
- Simon Bray2
- Simon Gladman2
- Swathi Nataraj2
- Ahmed Hamid Awan1
- Amirhossein Naghsh Nilchi1
- Ava Hoffman1
- Bert Droesbeke1
- Candace Savonen1
- Clemens Blank1
- Elizabeth Humphries1
- Engy Nasr1
- Frederick Tan1
- Graeme Tyson1
- José Manuel Domínguez1
- Katarzyna Kamieniecka1
- Katherine Cox1
- Khaled Jum'ah1
- Matthias Bernt1
- Matti Hoch1
- Matúš Kalaš1
- Mira Kuntz1
- Mélanie Petera1
- Nate Coraor1
- Nuwan Goonasekera1
- Paul Zierep1
- Peter van Heusden1
- Polina Polunina1
- Sanjay Kumar Srikakulam1
- Siyu Chen1
- Subina Mehta1
- Timon Schlegel1
- Yvan Le Bras1
- pimarin1
- Show N_FILTERS more
-
-
-
Resource type
- e-learning26
- slides6
- Show N_FILTERS more
-
-
-
Related resource
- Associated Training Datasets32
- Associated Workflows31
- Show N_FILTERS more
-
- Show disabled materials
- Show archived materials