Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Genome sequencing
    • Exomes17
    • Genome annotation17
    • Genomes17
    • Genomics17
    • Personal genomics17
    • Synthetic genomics17
    • Viral genomics17
    • Whole genomes17
    • Algorithms12
    • Antimicrobial stewardship12
    • Computer programming12
    • Data structures12
    • Medical microbiology12
    • Microbial genetics12
    • Microbial physiology12
    • Microbial surveillance12
    • Microbiological surveillance12
    • Microbiology12
    • Molecular infection biology12
    • Molecular microbiology12
    • Programming languages12
    • Software development12
    • Software engineering12
    • Biological sequences10
    • Sequence analysis10
    • Sequence databases10
    • Assembly9
    • Sequence assembly9
    • Comparative transcriptomics5
    • Transcriptome5
    • Transcriptomics5
    • De novo genome sequencing4
    • WGS4
    • Whole genome resequencing4
    • Whole genome sequencing4
    • Epidemiology3
    • Gene and protein families3
    • Gene families3
    • Gene family3
    • Gene system3
    • Genes, gene family or system3
    • Protein families3
    • Protein sequence classification3
    • Public health3
    • Public health and epidemiology3
    • AMR2
    • Antibiotic resistance (ABR)2
    • Antifungal resistance2
    • Antimicrobial resistance2
    • Antiprotozoal resistance2
    • Antiviral resistance2
    • DNA variation2
    • Extensive drug resistance (XDR)2
    • Genetic variation2
    • Genomic variation2
    • Multidrug resistance2
    • Multiple drug resistance (MDR)2
    • Multiresistance2
    • Mutation2
    • Pandrug resistance (PDR)2
    • Phylogenetic clocks2
    • Phylogenetic dating2
    • Phylogenetic simulation2
    • Phylogenetic stratigraphy2
    • Phylogeny2
    • Phylogeny reconstruction2
    • Polymorphism2
    • Somatic mutations2
    • Total drug resistance (TDR)2
    • Communicable disease1
    • Comparative genomics1
    • Computational ecology1
    • Content management1
    • DNA polymorphism1
    • Data management1
    • Database management1
    • Document management1
    • Ecoinformatics1
    • Ecological informatics1
    • Ecology1
    • Ecosystem science1
    • Evolution1
    • Evolutionary biology1
    • File management1
    • Functional genomics1
    • Genetic linkage1
    • Infectious disease1
    • Informatics1
    • Information management1
    • Information science1
    • Knowledge management1
    • Linkage1
    • Linkage mapping1
    • Low complexity sequences1
    • Mapping1
    • Metadata management1
    • Microsatellites1
    • Mobile genetic elements1
    • Nucleic acid repeats1
    • Show N_FILTERS more
    • Tool
    • Galaxy4
    • Bakta2
    • Bandage2
    • FastQC2
    • JBrowse2
    • QUAST2
    • fastp2
    • tbl2gff32
    • Bowtie 21
    • Bwa-mem21
    • Falco1
    • Filtlong1
    • Flye1
    • ISEScan1
    • Integron Finder1
    • NanoPlot1
    • PlasmidFinder1
    • Polypolish1
    • shovill1
    • staramr1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training4
    • Show N_FILTERS more
    • Keyword
    • microgalaxy4
    • illumina3
    • Assembly2
    • Genome Annotation2
    • amr2
    • assembly2
    • gmod2
    • jbrowse12
    • bacteria1
    • nanopore1
    • one-health1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International4
    • Show N_FILTERS more
    • Target audience
    • Students4
    • Show N_FILTERS more
    • Author
    • Bérénice Batut4
    • Bazante Sanders3
    • Show N_FILTERS more
    • Contributor
    • Anthony Bretaudeau
    • Björn Grüning5
    • Bérénice Batut5
    • Helena Rasche5
    • Saskia Hiltemann5
    • Bazante Sanders3
    • Miaomiao Zhou3
    • Teresa Müller3
    • Clea Siguret2
    • Cristóbal Gallardo2
    • Deepti Varshney2
    • Verena Moosmann2
    • Wolfgang Maier2
    • pimarin2
    • Matúš Kalaš1
    • Nate Coraor1
    • Paul Zierep1
    • Show N_FILTERS more
    • Resource type
    • e-learning4
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets4
    • Associated Workflows4
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Contributors: Anthony Bretaudeau

and Scientific topics: Genome sequencing

and Difficulty level: Beginner

4 materials found
  • e-learning

    Bacterial Genome Annotation

    • beginner
    Genomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod …
  • e-learning

    Identification of AMR genes in an assembled bacterial genome

    • beginner
    Genomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod …
  • e-learning

    Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

    • beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy …
  • e-learning

    Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

    • beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.