Training materials
-
e-learning
Calling variants in non-diploid systems
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
e-learning
Using dataset collections
•• intermediateUsing Galaxy and Managing your Data collections -
e-learning
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote … -
e-learning
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• intermediateGenetic variation Variant Analysis covid19 one-health virology -
e-learning
Functionally Assembled Terrestrial Ecosystem Simulator (FATES)
• beginnerClimate interactive-tools -
e-learning
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
e-learning
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
e-learning
Reference-based RNAseq data analysis (long)
• beginnerTranscriptomics -
e-learning
CLIP-Seq data analysis from pre-processing to motif detection
• beginnerTranscriptomics -
e-learning
Differential abundance testing of small RNAs
• beginnerTranscriptomics