- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Algorithms22
- Computer programming22
- Data structures22
- Programming languages22
- Software development22
- Software engineering22
- Biological sequences18
- Comparative transcriptomics18
- Sequence analysis18
- Sequence databases18
- Transcriptome18
- Transcriptomics18
- Antimicrobial stewardship14
- Medical microbiology14
- Microbial genetics14
- Microbial physiology14
- Microbial surveillance14
- Microbiological surveillance14
- Microbiology14
- Molecular infection biology14
- Molecular microbiology14
- Assembly13
- Bayesian methods13
- Biostatistics13
- Computational ecology13
- Descriptive statistics13
- Ecoinformatics13
- Ecological informatics13
- Ecology13
- Ecosystem science13
- Exomes13
- Gaussian processes13
- Genome annotation13
- Genomes13
- Genomics13
- Inferential statistics13
- Markov processes13
- Multivariate statistics13
- Personal genomics13
- Probabilistic graphical model13
- Probability13
- Sequence assembly13
- Statistics13
- Statistics and probability13
- Synthetic genomics13
- Viral genomics13
- Whole genomes13
- Epigenomics12
- Bottom-up proteomics10
- DNA variation10
- Discovery proteomics10
- Genetic variation10
- Genomic variation10
- MS-based targeted proteomics10
- MS-based untargeted proteomics10
- Metaproteomics10
- Mutation10
- Peptide identification10
- Polymorphism10
- Protein and peptide identification10
- Proteomics10
- Quantitative proteomics10
- Somatic mutations10
- Targeted proteomics10
- Top-down proteomics10
- Community analysis9
- Environmental microbiology9
- Microbial ecology9
- Microbiome9
- Molecular community analysis9
- Metagenomics8
- Shotgun metagenomics8
- De novo genome sequencing5
- Epidemiology5
- Genome sequencing5
- Public health5
- Public health and epidemiology5
- Taxonomy5
- WGS5
- Whole genome resequencing5
- Whole genome sequencing5
- Diffraction experiment4
- Imaging4
- Microscopy4
- Microscopy imaging4
- Optical super resolution microscopy4
- Photonic force microscopy4
- Photonic microscopy4
- AMR3
- Antibiotic resistance (ABR)3
- Antifungal resistance3
- Antimicrobial resistance3
- Antiprotozoal resistance3
- Antiviral resistance3
- Communicable disease3
- DNA metabarcoding3
- Environmental metabarcoding3
- Exometabolomics3
- Extensive drug resistance (XDR)3
- Infectious disease3
- Show N_FILTERS more
-
-
-
Tool
- Galaxy148
- FastQC22
- SAMtools19
- BEDTools13
- BWA12
- DeepTools10
- MultiQC9
- scikit-learn9
- fastp8
- Cutadapt7
- SCANPY7
- FreeBayes6
- NanoPlot6
- STAR6
- Trimmomatic6
- GEMINI5
- JBrowse5
- ggplot25
- taxonomy_krona_chart5
- Bandage4
- Bowtie 24
- MACS4
- kraken24
- BLAST3
- BamTools3
- Diamond3
- FASTX-Toolkit3
- Flye3
- Galactic Circos3
- HISAT23
- Minimap23
- QUAST3
- RSeQC3
- Stacks3
- snpEff3
- BCFtools2
- Bakta2
- Biopython2
- Bwa-mem22
- Cardinal2
- CellProfiler2
- ChIPpeakAnno2
- DropletUtils2
- GOEnrichment2
- GOseq2
- Galaxy Image Analysis2
- HUMAnN22
- InterProScan (EBI)2
- MEME2
- MSstats2
- MaxQuant2
- MetaPhlAn2
- Newick Utilities2
- Salmon2
- SeqCode2
- Trim Galore2
- Unicycler2
- Vcflib2
- Workflow4Metabolomics2
- bx-python2
- clusterProfiler2
- ewastools2
- gfastats2
- lofreq2
- mothur2
- pyGenomeTracks2
- pycoQC2
- scikit-image2
- staramr2
- tbl2gff32
- xcms2
- ABRicate1
- Alevin1
- BUSCO1
- Bowtie1
- Bracken1
- ChiRA1
- Circos1
- Clair31
- Clustal 2 (Clustal W, Clustal X)1
- DESeq21
- EGSEA1
- EncyclopeDIA1
- European Nucleotide Archive (ENA)1
- FREEC1
- FastTree1
- FeatureCounts1
- Filtlong1
- GenomeScope 2.01
- GraPhlAn1
- HiCExplorer1
- IDR1
- ISEScan1
- IWTomics1
- Integron Finder1
- IsoformSwitchAnalyzeR1
- KrakenTools1
- Krona1
- MAGeCK1
- MLST1
- Show N_FILTERS more
-
-
-
Content provider
- Galaxy Training263
- Show N_FILTERS more
-
-
-
Keyword
- Galaxy Server administration35
- Single Cell23
- Transcriptomics18
- microgalaxy18
- Contributing to the Galaxy Training Material17
- Development in Galaxy15
- ansible15
- Ecology13
- Statistics and machine learning13
- git-gat13
- Epigenetics12
- interactive-tools12
- 10x11
- Introduction to Galaxy Analyses11
- earth-system11
- Assembly10
- Proteomics10
- Teaching and Hosting Galaxy training10
- Using Galaxy and Managing your Data10
- Variant Analysis10
- paper-replication9
- Genome Annotation8
- MIGHTS8
- Microbiome8
- jupyter-notebook8
- Climate7
- FAIR Data, Workflows, and Research7
- Foundations of Data Science7
- ocean7
- plants7
- prokaryote7
- DDA6
- EBV workflow6
- Sequence analysis6
- data stewardship6
- fair6
- jbrowse16
- EBV dataset5
- dmp5
- gmod5
- jobs5
- Imaging4
- QC4
- assembly4
- illumina4
- mouse4
- nanopore4
- work-in-progress4
- ChIP-seq3
- Genetic composition EBV class3
- Metabolomics3
- RAD-seq3
- Visualisation3
- amr3
- bacteria3
- cyoa3
- monitoring3
- one-health3
- 16S2
- Data Paper2
- EML2
- FAIR2
- HeLa2
- Metadata2
- Python2
- Species population EBV class2
- Species populations EBV class2
- collections2
- covid192
- deep-learning2
- deploying2
- essential genes2
- eukaryote2
- jupyter-lab2
- machine-learning2
- marine omics2
- metabarcoding2
- modeling2
- netcdf data2
- storage2
- subdomain2
- workflows2
- Biodiversity1
- CRISPR1
- Community composition EBV class1
- DIA1
- Evolution1
- FAIR Learning Objects1
- FAIR-by-Design Learning Materials1
- FAIR-by-Design Methodology1
- GIS1
- GO enrichment1
- Galaxy Community Building1
- Geographical Information System1
- Heatmap1
- Maps1
- Materials Science1
- NDVI1
- Nanopore data analysis1
- ODV1
- Show N_FILTERS more
-
-
-
Difficulty level
- Beginner
- Intermediate55
- Advanced8
- Not specified1
- Show N_FILTERS more
-
-
-
Target audience
- Students185
- Galaxy Administrators50
- Instructors28
- Show N_FILTERS more
-
-
-
Author
- Bérénice Batut54
- Helena Rasche53
- Saskia Hiltemann31
- Björn Grüning27
- Anton Nekrutenko18
- Nicola Soranzo17
- Simon Gladman17
- Nate Coraor14
- Yvan Le Bras13
- Wendi Bacon12
- Marie Josse11
- Mehmet Tekman11
- Anthony Bretaudeau10
- Maria Doyle10
- Anup Kumar9
- Fotis E. Psomopoulos9
- Katarzyna Kamieniecka9
- Anika Erxleben8
- Anne Fouilloux8
- Cristóbal Gallardo8
- Dave Clements8
- Krzysztof Poterlowicz8
- Pavankumar Videm8
- Joachim Wolff7
- Khaled Jum'ah7
- Daniel Blankenberg6
- Delphine Lariviere6
- Melanie Föll6
- Allegra Via5
- Andrew Mason5
- Anne Pajon5
- Branka Franicevic5
- ELIXIR Goblet Train the Trainers5
- Kellie Snow5
- Korneel Hens5
- Laura Cooper5
- Marius van den Beek5
- Munazah Andrabi5
- Nick Juty5
- Patricia Palagi5
- Philippe Rocca-Serra5
- Robert Andrews5
- Sara Morsy5
- Saskia Lawson-Tovey5
- Wolfgang Maier5
- Xenia Perez Sitja5
- Alex Ostrovsky4
- Alireza Khanteymoori4
- Anna Syme4
- Beatriz Serrano-Solano4
- Clemens Blank4
- Erwan Corre4
- John Chilton4
- Julia Jakiela4
- Mallory Freeberg4
- Martin Čech4
- Mira Kuntz4
- Vivek Bhardwaj4
- Alexandre Cormier3
- Bazante Sanders3
- Belinda Phipson3
- Fidel Ramirez3
- Florian Christoph Sigloch3
- Florian Heyl3
- Gianmauro Cuccuru3
- Laura Leroi3
- Lucille Delisle3
- Mo Heydarian3
- Morgan Howells3
- Nadia Goué3
- Pratik Jagtap3
- Simon Bray3
- Stéphanie Robin3
- Subina Mehta3
- Youri Hoogstrate3
- Aysam Guerler2
- Cameron Hyde2
- Christopher Barnett2
- Coline Royaux2
- Cyril Monjeaud2
- Dannon Baker2
- Diana Chiang Jurado2
- Ekaterina Polkh2
- Engy Nasr2
- Friederike Dündar2
- Gildas Le Corguillé2
- Hans-Rudolf Hotz2
- Harriet Dashnow2
- James Johnson2
- Jean-François Martin2
- Jonathan Manning2
- Kaivan Kamali2
- Leily Rabbani2
- Leonid Kostrykin2
- Matthias Fahrner2
- Michele Maroni2
- Mélanie Petera2
- Olha Nahorna2
- Paul Zierep2
- Timothy J. Griffin2
- Show N_FILTERS more
-
-
-
Contributor
- Björn Grüning
- Saskia Hiltemann397
- Helena Rasche386
- Bérénice Batut175
- Nicola Soranzo132
- Cristóbal Gallardo82
- Niall Beard72
- Anthony Bretaudeau70
- Martin Čech63
- Nate Coraor59
- Wendi Bacon51
- Gildas Le Corguillé50
- William Durand49
- Mehmet Tekman43
- Marius van den Beek41
- Simon Gladman41
- Lucille Delisle37
- Yvan Le Bras34
- Pavankumar Videm30
- Teresa Müller25
- Beatriz Serrano-Solano22
- Maria Doyle22
- Julia Jakiela20
- Anne Fouilloux19
- Khaled Jum'ah17
- Melanie Föll16
- Wolfgang Maier16
- Anup Kumar15
- Simon Bray15
- Deepti Varshney14
- Donny Vrins14
- Bazante Sanders13
- Marie Josse13
- Matthias Bernt12
- Pablo Moreno12
- Pratik Jagtap12
- Timothy J. Griffin12
- Anton Nekrutenko11
- Mélanie Petera11
- Peter van Heusden11
- David López10
- Gianmauro Cuccuru10
- Katarzyna Kamieniecka10
- Marisa Loach10
- Mira Kuntz10
- Paul Zierep8
- Delphine Lariviere7
- Hans-Rudolf Hotz7
- John Chilton7
- Kaivan Kamali7
- Melissa Burke7
- Dave Clements6
- Ekaterina Polkh6
- Alex Ostrovsky5
- Alexandre Cormier5
- Alireza Khanteymoori5
- Bert Droesbeke5
- Florian Heyl5
- John Davis5
- Mallory Freeberg5
- Sabine Österle5
- Stéphanie Robin5
- Subina Mehta5
- Tomas Klingström5
- Anna Syme4
- Clea Siguret4
- Coline Royaux4
- Daniel Sobral4
- Dave B.4
- Eli Chadwick4
- Enis Afgan4
- Fotis E. Psomopoulos4
- Andrea Bagnacani3
- Catherine Bromhead3
- Clemens Blank3
- David Philip Judge3
- Eija Korpelainen3
- Gautier Sarah3
- Jean-François Dufayard3
- Jennifer Hillman-Jackson3
- Joachim Wolff3
- Krzysztof Poterlowicz3
- Mateo Boudet3
- Mateusz Kuzak3
- Miaomiao Zhou3
- Nuwan Goonasekera3
- Pedro Fernandes3
- Pinar Alper3
- Roland Krause3
- Ross Lazarus3
- Sofoklis Keisaris3
- Vlad Visan3
- Xavier Garnier3
- Ahmed Hamid Awan2
- Amirhossein Naghsh Nilchi2
- Anika Erxleben2
- Camila Goclowski2
- CicoZhang2
- Dannon Baker2
- Edwin den Haas2
- Show N_FILTERS more
-
-
-
Resource type
- e-learning212
- slides51
- Show N_FILTERS more
-
-
-
Related resource
- Associated Training Datasets162
- Associated Workflows130
- Quarto/RMarkdown Notebook100
- ansible16
- git-gat13
- Jupyter Notebook (with Solutions)8
- Jupyter Notebook (without Solutions)8
- jobs5
- monitoring3
- deploying2
- storage2
- workflows2
- DDA1
- authentication1
- automation1
- broken1
- cloud1
- cyoa1
- features1
- interactive-tools1
- ro-crate1
- terraform1
- tools1
- training1
- Show N_FILTERS more
-
- Show disabled materials
- Show archived materials