Training materials
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e-learning
Quality and contamination control in bacterial isolate using Illumina MiSeq Data
• beginnerSequence analysis Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy -
e-learning
Single-cell ATAC-seq standard processing with SnapATAC2
•• intermediate10x Single Cell epigenetics single-cell -
e-learning
Genome-wide alternative splicing analysis
••• advancedTranscriptomics alternative splicing isoform switching -
e-learning
Regional GAM
• beginnerEcology EBV dataset EBV workflow Species populations EBV class Species traits EBV class biodiversity -
e-learning
RAD-Seq Reference-based data analysis
• beginnerEcology EBV dataset EBV workflow Genetic composition EBV class RAD-seq Species population EBV class biodiversity -
e-learning
From NDVI data with OpenEO to time series visualisation with Holoviews
• beginnerEcology NDVI copernicus earth-system holoviews land degradation -
e-learning
RAD-Seq to construct genetic maps
• beginnerEcology EBV dataset EBV workflowz Genetic composition EBV class RAD-seq biodiversity -
e-learning
QGIS Web Feature Services
• beginnerEcology GIS Geographical Information System Maps OGC Spatial data WFS biodiversity earth-system -
e-learning
Compute and analyze biodiversity metrics with PAMPA toolsuite
• beginnerEcology Community composition EBV class EBV dataset EBV workflow Species population EBV class biodiversity modeling -
e-learning
Creating metadata using Ecological Metadata Language (EML) standard with EML Assembly Line functionalities
• beginnerEcology Biodiversity Data Paper EML FAIR Metadata