Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Transcriptome
    • Assembly14
    • Sequence assembly14
    • Exomes12
    • Genome annotation12
    • Genomes12
    • Genomics12
    • Personal genomics12
    • Synthetic genomics12
    • Viral genomics12
    • Whole genomes12
    • Algorithms9
    • Computer programming9
    • Data structures9
    • Programming languages9
    • Software development9
    • Software engineering9
    • Biological sequences8
    • Comparative transcriptomics8
    • Sequence analysis8
    • Sequence databases8
    • Transcriptomics8
    • Community analysis6
    • Environmental microbiology6
    • Epigenomics6
    • Metagenomics6
    • Microbial ecology6
    • Microbiome6
    • Molecular community analysis6
    • Shotgun metagenomics6
    • Biodiversity5
    • Epidemiology4
    • Public health4
    • Public health and epidemiology4
    • Taxonomy4
    • Antimicrobial stewardship3
    • Exometabolomics3
    • LC-MS-based metabolomics3
    • MS-based metabolomics3
    • MS-based targeted metabolomics3
    • MS-based untargeted metabolomics3
    • Mass spectrometry-based metabolomics3
    • Medical microbiology3
    • Metabolites3
    • Metabolome3
    • Metabolomics3
    • Metabonomics3
    • Microbial genetics3
    • Microbial physiology3
    • Microbial surveillance3
    • Microbiological surveillance3
    • Microbiology3
    • Molecular infection biology3
    • Molecular microbiology3
    • NMR-based metabolomics3
    • Bayesian methods2
    • Biostatistics2
    • DNA variation2
    • De novo genome sequencing2
    • Descriptive statistics2
    • Diffraction experiment2
    • Gaussian processes2
    • Genetic variation2
    • Genome sequencing2
    • Genomic variation2
    • Imaging2
    • Inferential statistics2
    • Markov processes2
    • Microscopy2
    • Microscopy imaging2
    • Multivariate statistics2
    • Mutation2
    • Optical super resolution microscopy2
    • Photonic force microscopy2
    • Photonic microscopy2
    • Polymorphism2
    • Probabilistic graphical model2
    • Probability2
    • Somatic mutations2
    • Statistics2
    • Statistics and probability2
    • WGS2
    • Whole genome resequencing2
    • Whole genome sequencing2
    • 3C technologies1
    • 3C-based methods1
    • AMR1
    • Antibiotic resistance (ABR)1
    • Antifungal resistance1
    • Antimicrobial resistance1
    • Antiprotozoal resistance1
    • Antiviral resistance1
    • Biomimeic chemistry1
    • Bottom-up proteomics1
    • Chromatin accessibility1
    • Chromatin accessibility assay1
    • Chromosome conformation analysis1
    • Chromosome conformation capture1
    • Communicable disease1
    • Computational ecology1
    • Show N_FILTERS more
    • Tool
    • Galaxy6
    • MultiQC3
    • RSeQC3
    • STAR3
    • pyGenomeTracks3
    • FastQC2
    • Heinz2
    • IsoformSwitchAnalyzeR2
    • PfamScan2
    • StringTie2
    • fastp2
    • gffcompare2
    • gffread2
    • rnaQUAST2
    • Biopython1
    • Cutadapt1
    • DESeq21
    • Falco1
    • FeatureCounts1
    • GOseq1
    • R1
    • SAMtools1
    • Salmon1
    • Targetfinder.org1
    • ggplot21
    • miRDeep21
    • pathview1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training8
    • Show N_FILTERS more
    • Keyword
    • Transcriptomics8
    • QC1
    • alternative splicing1
    • bulk1
    • collections1
    • cyoa1
    • drosophila1
    • isoform switching1
    • metatranscriptomics1
    • miRNA1
    • network analysis1
    • plants1
    • rna-seq1
    • stress tolerance1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner7
    • Advanced1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International8
    • Show N_FILTERS more
    • Target audience
    • Students8
    • Show N_FILTERS more
    • Author
    • Cristóbal Gallardo3
    • Anika Erxleben2
    • Bérénice Batut2
    • Chao Zhang2
    • Lucille Delisle2
    • Pavankumar Videm2
    • Anne Siegel1
    • Anthony Bretaudeau1
    • Beatriz Serrano-Solano1
    • Clemens Blank1
    • Mallory Freeberg1
    • Maria Doyle1
    • Markus Wolfien1
    • Mateo Boudet1
    • Mo Heydarian1
    • Nicola Soranzo1
    • Olivier Dameron1
    • Peter van Heusden1
    • Sanne Abeln1
    • Xavier Garnier1
    • Show N_FILTERS more
    • Contributor
    • Cristóbal Gallardo
    • Saskia Hiltemann26
    • Helena Rasche24
    • Björn Grüning20
    • Nicola Soranzo13
    • Bérénice Batut11
    • Gildas Le Corguillé6
    • Lucille Delisle6
    • Maria Doyle6
    • Niall Beard6
    • Anthony Bretaudeau5
    • William Durand5
    • Martin Čech4
    • Pavankumar Videm4
    • Armin Dadras3
    • Mallory Freeberg3
    • Wolfgang Maier3
    • Xavier Garnier3
    • CicoZhang2
    • Marius van den Beek2
    • Mehmet Tekman2
    • Amirhossein Naghsh Nilchi1
    • Andrea Bagnacani1
    • Anika Erxleben1
    • Anne Fouilloux1
    • Beatriz Serrano-Solano1
    • Clea Siguret1
    • Clemens Blank1
    • Eija Korpelainen1
    • Ekaterina Polkh1
    • Florian Heyl1
    • Fotis E. Psomopoulos1
    • Graeme Tyson1
    • Hans-Rudolf Hotz1
    • IGC Bioinformatics Unit1
    • James Taylor1
    • José Manuel Domínguez1
    • Linelle Abueg1
    • Maria Lehtivaara1
    • Mateusz Kuzak1
    • Matti Hoch1
    • Mira Kuntz1
    • Mo Heydarian1
    • Mélanie Petera1
    • Nate Coraor1
    • Peter-Bram 't Hoen1
    • Sanjay Kumar Srikakulam1
    • Simon Bray1
    • Sofoklis Keisaris1
    • Teresa Müller1
    • The Carpentries1
    • Show N_FILTERS more
    • Resource type
    • e-learning4
    • slides4
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets7
    • Associated Workflows6
    • Quarto/RMarkdown Notebook1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Transcriptome

and Contributors: Cristóbal Gallardo

8 materials found
  • e-learning

    Genome-wide alternative splicing analysis

    ••• advanced
    Transcriptomics alternative splicing isoform switching
  • e-learning

    Network analysis with Heinz

    • beginner
    Transcriptomics metatranscriptomics network analysis
  • e-learning

    Whole transcriptome analysis of Arabidopsis thaliana

    • beginner
    Transcriptomics miRNA plants stress tolerance
  • slides

    Identification of non-canonical ORFs and their potential biological function

    • beginner
    Transcriptomics
  • slides

    Network Analysis with Heinz

    • beginner
    Transcriptomics
  • slides

    Integrate and query local datasets and distant RDF data with AskOmics using Semantic Web technologies

    • beginner
    Transcriptomics
  • slides

    Introduction to Transcriptomics

    • beginner
    Transcriptomics
  • e-learning

    Reference-based RNA-Seq data analysis

    • beginner
    Transcriptomics QC bulk collections cyoa drosophila rna-seq
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.