Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Assembly5
    • Sequence assembly5
    • Exomes4
    • Genome annotation4
    • Genomes4
    • Genomics4
    • Personal genomics4
    • Synthetic genomics4
    • Viral genomics4
    • Whole genomes4
    • Biodiversity3
    • Antimicrobial stewardship1
    • De novo genome sequencing1
    • Epidemiology1
    • Genome sequencing1
    • Medical microbiology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Molecular infection biology1
    • Molecular microbiology1
    • Public health1
    • Public health and epidemiology1
    • WGS1
    • Whole genome resequencing1
    • Whole genome sequencing1
    • Show N_FILTERS more
    • Tool
    • Galaxy5
    • Bandage3
    • BUSCO2
    • FastQC2
    • Flye2
    • GenomeScope 2.02
    • Minimap22
    • NanoPlot2
    • QUAST2
    • fastp2
    • gfastats2
    • BLAST1
    • BWA1
    • Bwa-mem21
    • Diamond1
    • Falco1
    • Medaka1
    • Merqury1
    • MultiQC1
    • Racon1
    • SAMtools1
    • Smudgeplots1
    • kraken21
    • pilon1
    • shovill1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training5
    • Show N_FILTERS more
    • Keyword
    • Assembly
    • microgalaxy6
    • plants6
    • Microbiome5
    • biodiversity5
    • Genome Annotation4
    • assembly3
    • jbrowse13
    • nanopore3
    • 16S2
    • illumina2
    • metabarcoding2
    • metagenomics2
    • Braker31
    • Heatmap1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • QC1
    • Sequence analysis1
    • Using Galaxy and Managing your Data1
    • amr1
    • animals1
    • binning1
    • cyoa1
    • diversity1
    • eukaryota1
    • eukaryote1
    • genome1
    • gmod1
    • one-health1
    • polishing1
    • prokaryote1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner5
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International5
    • Show N_FILTERS more
    • Target audience
    • Students5
    • Show N_FILTERS more
    • Author
    • Anna Syme2
    • Delphine Lariviere2
    • Bazante Sanders1
    • Bérénice Batut1
    • Cristóbal Gallardo1
    • Fabian Recktenwald1
    • Tom Brown1
    • Show N_FILTERS more
    • Contributor
    • Deepti Varshney
    • Bérénice Batut17
    • Saskia Hiltemann16
    • Björn Grüning15
    • Helena Rasche14
    • Cristóbal Gallardo10
    • Anthony Bretaudeau7
    • Anna Syme5
    • Delphine Lariviere5
    • Teresa Müller5
    • Anton Nekrutenko4
    • Niall Beard4
    • Nicola Soranzo4
    • Maria Doyle3
    • Simon Gladman3
    • William Durand3
    • Bazante Sanders2
    • Gildas Le Corguillé2
    • Linelle Abueg2
    • Miaomiao Zhou2
    • Solenne Correard2
    • Wolfgang Maier2
    • Alexandre Cormier1
    • Enis Afgan1
    • Marius van den Beek1
    • Matúš Kalaš1
    • Nate Coraor1
    • Polina Polunina1
    • Saim Momin1
    • Stéphanie Robin1
    • Tom Brown1
    • Verena Moosmann1
    • pimarin1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows5
    • Associated Training Datasets4
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Keywords: Assembly

and Contributors: Deepti Varshney

and Resource type: e-learning

5 e-learning materials found
  • e-learning

    Decontamination of a genome assembly

    • beginner
    Sequence assembly Genomics Biodiversity Assembly biodiversity
  • e-learning

    Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

    • beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
  • e-learning

    Chloroplast genome assembly

    • beginner
    Sequence assembly Assembly biodiversity jbrowse1 nanopore plants
  • e-learning

    Large genome assembly and polishing

    • beginner
    Sequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing
  • e-learning

    ERGA post-assembly QC

    • beginner
    Sequence assembly Genomics Biodiversity Assembly QC animals assembly biodiversity genome plants
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.