Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Biological sequences3
    • Community analysis3
    • Environmental microbiology3
    • Metagenomics3
    • Microbial ecology3
    • Microbiome3
    • Molecular community analysis3
    • Sequence analysis3
    • Sequence databases3
    • Shotgun metagenomics3
    • Taxonomy3
    • Assembly1
    • DNA metabarcoding1
    • Disease1
    • Environmental metabarcoding1
    • Epidemiology1
    • Function analysis1
    • Functional analysis1
    • Metabarcoding1
    • Metatranscriptomics1
    • Pathology1
    • Protein function analysis1
    • Protein function prediction1
    • Public health1
    • Public health and epidemiology1
    • RNA metabarcoding1
    • Sequence assembly1
    • eDNA metabarcoding1
    • eRNA metabarcoding1
    • Show N_FILTERS more
    • Tool
    • Galaxy
    • taxonomy_krona_chart3
    • FastQC2
    • MetaPhlAn2
    • MultiQC2
    • ABRicate1
    • BCFtools1
    • BEDTools1
    • BamTools1
    • Bandage1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • Combine Metaphlan and HUMAnN1
    • Cutadapt1
    • FastTree1
    • Flye1
    • GraPhlAn1
    • HUMAnN21
    • KrakenTools1
    • Krona1
    • MLST1
    • Medaka1
    • Minimap21
    • NanoPlot1
    • Newick Utilities1
    • SAMtools1
    • SortMeRNA1
    • export2graphlan1
    • fastp1
    • ggplot21
    • humann1
    • kraken21
    • mothur1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training3
    • Show N_FILTERS more
    • Keyword
    • Microbiome3
    • microgalaxy3
    • Heatmap1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • cyoa1
    • metatranscriptomics1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Bérénice Batut3
    • Saskia Hiltemann2
    • Emma Leith1
    • Engy Nasr1
    • Paul Zierep1
    • Pratik Jagtap1
    • Praveen Kumar1
    • Ray Sajulga1
    • Subina Mehta1
    • Show N_FILTERS more
    • Contributor
    • Engy Nasr
    • Saskia Hiltemann271
    • Helena Rasche227
    • Björn Grüning224
    • Bérénice Batut126
    • Nicola Soranzo63
    • Anthony Bretaudeau50
    • Martin Čech42
    • Niall Beard40
    • Cristóbal Gallardo38
    • Teresa Müller35
    • Armin Dadras34
    • Gildas Le Corguillé32
    • Pavankumar Videm32
    • Wolfgang Maier32
    • Mehmet Tekman31
    • Wendi Bacon31
    • Melanie Föll29
    • Yvan Le Bras29
    • Subina Mehta27
    • William Durand27
    • Nate Coraor21
    • Simon Bray21
    • Maria Doyle20
    • Anup Kumar16
    • Beatriz Serrano-Solano16
    • Deepti Varshney15
    • Julia Jakiela14
    • Anton Nekrutenko13
    • Pratik Jagtap13
    • Timothy J. Griffin13
    • Anne Fouilloux12
    • Lucille Delisle12
    • Pablo Moreno11
    • Leonid Kostrykin10
    • Marius van den Beek10
    • Mélanie Petera10
    • Paul Zierep10
    • Simon Gladman10
    • Marie Josse9
    • Marisa Loach9
    • Matthias Bernt9
    • Stéphanie Robin9
    • Amirhossein Naghsh Nilchi8
    • Delphine Lariviere8
    • Peter van Heusden8
    • Verena Moosmann8
    • David López7
    • Katherine Do7
    • Anna Syme6
    • Daniela Schneider6
    • Diana Chiang Jurado6
    • Hans-Rudolf Hotz6
    • Linelle Abueg6
    • Mallory Freeberg6
    • Morgan Howells6
    • Alireza Khanteymoori5
    • Bert Droesbeke5
    • Clea Siguret5
    • Clemens Blank5
    • Florian Heyl5
    • Kaivan Kamali5
    • Alexandre Cormier4
    • Christopher Barnett4
    • Coline Royaux4
    • Dave Clements4
    • Florian Christoph Sigloch4
    • Bazante Sanders3
    • Donny Vrins3
    • Ekaterina Polkh3
    • Fabio Cumbo3
    • Jasper Ouwerkerk3
    • Khaled Jum'ah3
    • Mateusz Kuzak3
    • Miaomiao Zhou3
    • Riccardo Massei3
    • Timon Schlegel3
    • Alex Ostrovsky2
    • Anika Erxleben2
    • Carlos Chee Mendonça2
    • Christine Oger2
    • Christoph Stritt2
    • Enis Afgan2
    • Fidel Ramirez2
    • Florence Combes2
    • Fotis E. Psomopoulos2
    • Graeme Tyson2
    • Helge Hecht2
    • Jayadev Joshi2
    • Jennifer Hillman-Jackson2
    • Joachim Wolff2
    • Jonathan Kreplak2
    • Jonathan Manning2
    • Katarzyna Kamieniecka2
    • Kristina Gomoryova2
    • Laura Leroi2
    • Mateo Boudet2
    • Melissa Burke2
    • Michelle Terese Savage2
    • Nadia Goué2
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets3
    • Associated Workflows3
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Tools: Galaxy

and Contributors: Engy Nasr

and Resource type: e-learning

3 e-learning materials found
  • e-learning

    Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

    • beginner
    Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
  • e-learning

    Analyses of metagenomics data - The global picture

    • beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding Microbiome microgalaxy
  • e-learning

    Metatranscriptomics analysis using microbiome RNA-seq data

    • beginner
    Metagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.