Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Assembly3
    • Sequence assembly3
    • Exomes2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • Personal genomics2
    • Synthetic genomics2
    • Viral genomics2
    • Whole genomes2
    • 3C technologies1
    • 3C-based methods1
    • Antimicrobial stewardship1
    • Biodiversity1
    • Biological sequences1
    • Chromatin accessibility1
    • Chromatin accessibility assay1
    • Chromosome conformation analysis1
    • Chromosome conformation capture1
    • Communicable disease1
    • Community analysis1
    • Comparative transcriptomics1
    • DNA metabarcoding1
    • DNA variation1
    • Environmental metabarcoding1
    • Environmental microbiology1
    • Epidemiology1
    • Genetic variation1
    • Genomic variation1
    • Infectious disease1
    • Medical microbiology1
    • Metabarcoding1
    • Metagenomics1
    • Microbial ecology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Microbiome1
    • Molecular community analysis1
    • Molecular infection biology1
    • Molecular microbiology1
    • Mutation1
    • Polymorphism1
    • Public health1
    • Public health and epidemiology1
    • RNA metabarcoding1
    • Sequence analysis1
    • Sequence databases1
    • Shotgun metagenomics1
    • Somatic mutations1
    • Taxonomy1
    • Transcriptome1
    • Transcriptomics1
    • Transmissible disease1
    • eDNA metabarcoding1
    • eRNA metabarcoding1
    • Show N_FILTERS more
    • Tool
    • Galaxy
    • Cutadapt2
    • FastQC2
    • MultiQC2
    • QUAST2
    • BCFtools1
    • BEDTools1
    • BUSCO1
    • Bwa-mem21
    • COMBAT-TB Workbench1
    • FeatureCounts1
    • GOseq1
    • GenomeScope 2.01
    • HISAT21
    • JBrowse1
    • Jvarkit1
    • Merqury1
    • Minimap21
    • QualiMap1
    • RSeQC1
    • SALSA1
    • SAMtools1
    • SRA Software Toolkit1
    • annotatemyids1
    • dada21
    • fastp1
    • gfastats1
    • kraken21
    • limma1
    • phyloseq1
    • purge_dups1
    • snippy1
    • tb-profiler1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training6
    • Show N_FILTERS more
    • Keyword
    • Assembly2
    • VGP2
    • biodiversity2
    • eukaryote2
    • microgalaxy2
    • pacbio2
    • 16S1
    • Contributing to the Galaxy Training Material1
    • Microbiome1
    • Transcriptomics1
    • Variant Analysis1
    • bulk1
    • cyoa1
    • metabarcoding1
    • one-health1
    • prokaryote1
    • rna-seq1
    • tuberculosis1
    • viz1
    • Show N_FILTERS more
    • Difficulty level
    • Intermediate4
    • Beginner2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International6
    • Show N_FILTERS more
    • Target audience
    • Students5
    • Instructors1
    • Show N_FILTERS more
    • Author
    • Alex Ostrovsky2
    • Anton Nekrutenko2
    • Brandon Pickett2
    • Bérénice Batut2
    • Cristóbal Gallardo2
    • Delphine Lariviere2
    • Helena Rasche2
    • Linelle Abueg2
    • Anna Syme1
    • Giulio Formenti1
    • Iacopo Cristoferi1
    • Marcella Sozzoni1
    • Marek Ostaszewski1
    • Matti Hoch1
    • Myrthe van Baardwijk1
    • Peter van Heusden1
    • Saskia Hiltemann1
    • Simon Gladman1
    • Thoba Lose1
    • Show N_FILTERS more
    • Contributor
    • Linelle Abueg
    • Saskia Hiltemann256
    • Helena Rasche227
    • Björn Grüning212
    • Bérénice Batut126
    • Nicola Soranzo63
    • Anthony Bretaudeau49
    • Martin Čech42
    • Niall Beard40
    • Cristóbal Gallardo38
    • Teresa Müller34
    • Armin Dadras33
    • Gildas Le Corguillé32
    • Mehmet Tekman31
    • Wendi Bacon31
    • Wolfgang Maier31
    • Pavankumar Videm30
    • Melanie Föll29
    • Yvan Le Bras29
    • William Durand27
    • Subina Mehta24
    • Nate Coraor21
    • Simon Bray21
    • Maria Doyle20
    • Beatriz Serrano-Solano16
    • Anup Kumar15
    • Deepti Varshney15
    • Julia Jakiela14
    • Anton Nekrutenko13
    • Pratik Jagtap13
    • Timothy J. Griffin13
    • Anne Fouilloux12
    • Lucille Delisle12
    • Pablo Moreno11
    • Marius van den Beek10
    • Mélanie Petera10
    • Simon Gladman10
    • Marisa Loach9
    • Matthias Bernt9
    • Paul Zierep9
    • Stéphanie Robin9
    • Delphine Lariviere8
    • Leonid Kostrykin8
    • Marie Josse8
    • Peter van Heusden8
    • Verena Moosmann8
    • David López7
    • Anna Syme6
    • Hans-Rudolf Hotz6
    • Mallory Freeberg6
    • Morgan Howells6
    • Alireza Khanteymoori5
    • Bert Droesbeke5
    • Clea Siguret5
    • Clemens Blank5
    • Kaivan Kamali5
    • Alexandre Cormier4
    • Christopher Barnett4
    • Coline Royaux4
    • Dave Clements4
    • Diana Chiang Jurado4
    • Florian Christoph Sigloch4
    • Amirhossein Naghsh Nilchi3
    • Bazante Sanders3
    • Ekaterina Polkh3
    • Engy Nasr3
    • Fabio Cumbo3
    • Florian Heyl3
    • Jasper Ouwerkerk3
    • Khaled Jum'ah3
    • Mateusz Kuzak3
    • Miaomiao Zhou3
    • Riccardo Massei3
    • Timon Schlegel3
    • Alex Ostrovsky2
    • Anika Erxleben2
    • Carlos Chee Mendonça2
    • Christoph Stritt2
    • Daniela Schneider2
    • Donny Vrins2
    • Enis Afgan2
    • Fidel Ramirez2
    • Florence Combes2
    • Fotis E. Psomopoulos2
    • Graeme Tyson2
    • Helge Hecht2
    • Jayadev Joshi2
    • Jennifer Hillman-Jackson2
    • Joachim Wolff2
    • Jonathan Kreplak2
    • Jonathan Manning2
    • Katarzyna Kamieniecka2
    • Kristina Gomoryova2
    • Laura Leroi2
    • Mateo Boudet2
    • Melissa Burke2
    • Michelle Terese Savage2
    • Nadia Goué2
    • Natalie Kucher2
    • Romane LIBOUBAN2
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets5
    • Associated Workflows4
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Tools: Galaxy

and Contributors: Linelle Abueg

and Resource type: e-learning

6 e-learning materials found
  • e-learning

    Pathway analysis with the MINERVA Platform

    •• intermediate
    Transcriptomics bulk cyoa rna-seq viz
  • e-learning

    Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data

    •• intermediate
    Sequence assembly Chromosome conformation capture Assembly VGP biodiversity eukaryote pacbio
  • e-learning

    Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step

    •• intermediate
    Sequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio
  • e-learning

    Building an amplicon sequence variant (ASV) table from 16S data using DADA2

    • beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy
  • e-learning

    M. tuberculosis Variant Analysis

    •• intermediate
    Genetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …
  • e-learning

    Creating content in Markdown

    • beginner
    Contributing to the Galaxy Training Material
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.