Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Assembly3
    • Sequence assembly3
    • Exomes2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • Personal genomics2
    • Synthetic genomics2
    • Viral genomics2
    • Whole genomes2
    • 3C technologies1
    • 3C-based methods1
    • Antimicrobial stewardship1
    • Biodiversity1
    • Biological sequences1
    • Chromatin accessibility1
    • Chromatin accessibility assay1
    • Chromosome conformation analysis1
    • Chromosome conformation capture1
    • Communicable disease1
    • Community analysis1
    • Comparative transcriptomics1
    • DNA metabarcoding1
    • DNA variation1
    • Environmental metabarcoding1
    • Environmental microbiology1
    • Epidemiology1
    • Genetic variation1
    • Genomic variation1
    • Infectious disease1
    • Medical microbiology1
    • Metabarcoding1
    • Metagenomics1
    • Microbial ecology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Microbiome1
    • Molecular community analysis1
    • Molecular infection biology1
    • Molecular microbiology1
    • Mutation1
    • Polymorphism1
    • Public health1
    • Public health and epidemiology1
    • RNA metabarcoding1
    • Sequence analysis1
    • Sequence databases1
    • Shotgun metagenomics1
    • Somatic mutations1
    • Taxonomy1
    • Transcriptome1
    • Transcriptomics1
    • Transmissible disease1
    • eDNA metabarcoding1
    • eRNA metabarcoding1
    • Show N_FILTERS more
    • Tool
    • Galaxy5
    • Cutadapt2
    • FastQC2
    • MultiQC2
    • QUAST2
    • BCFtools1
    • BEDTools1
    • BUSCO1
    • Bwa-mem21
    • COMBAT-TB Workbench1
    • FeatureCounts1
    • GOseq1
    • GenomeScope 2.01
    • HISAT21
    • JBrowse1
    • Jvarkit1
    • Merqury1
    • Minimap21
    • QualiMap1
    • RSeQC1
    • SALSA1
    • SAMtools1
    • SRA Software Toolkit1
    • annotatemyids1
    • dada21
    • fastp1
    • gfastats1
    • kraken21
    • limma1
    • phyloseq1
    • purge_dups1
    • snippy1
    • tb-profiler1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training5
    • Show N_FILTERS more
    • Keyword
    • Assembly2
    • VGP2
    • biodiversity2
    • eukaryote2
    • microgalaxy2
    • pacbio2
    • 16S1
    • Microbiome1
    • Transcriptomics1
    • Variant Analysis1
    • bulk1
    • cyoa1
    • metabarcoding1
    • one-health1
    • prokaryote1
    • rna-seq1
    • tuberculosis1
    • viz1
    • Show N_FILTERS more
    • Difficulty level
    • Intermediate4
    • Beginner1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International5
    • Show N_FILTERS more
    • Target audience
    • Students
    • Instructors1
    • Show N_FILTERS more
    • Author
    • Alex Ostrovsky2
    • Anton Nekrutenko2
    • Brandon Pickett2
    • Cristóbal Gallardo2
    • Delphine Lariviere2
    • Linelle Abueg2
    • Anna Syme1
    • Bérénice Batut1
    • Giulio Formenti1
    • Helena Rasche1
    • Iacopo Cristoferi1
    • Marcella Sozzoni1
    • Marek Ostaszewski1
    • Matti Hoch1
    • Myrthe van Baardwijk1
    • Peter van Heusden1
    • Saskia Hiltemann1
    • Simon Gladman1
    • Thoba Lose1
    • Show N_FILTERS more
    • Contributor
    • Linelle Abueg
    • Saskia Hiltemann395
    • Helena Rasche357
    • Björn Grüning289
    • Bérénice Batut173
    • Nicola Soranzo83
    • Anthony Bretaudeau76
    • Cristóbal Gallardo73
    • Martin Čech55
    • Wendi Bacon55
    • Niall Beard50
    • Armin Dadras42
    • Teresa Müller41
    • William Durand41
    • Mehmet Tekman40
    • Gildas Le Corguillé38
    • Pavankumar Videm35
    • Melanie Föll34
    • Yvan Le Bras34
    • Beatriz Serrano-Solano31
    • Wolfgang Maier31
    • Marius van den Beek27
    • Subina Mehta27
    • Anup Kumar25
    • Simon Bray24
    • Donny Vrins22
    • Maria Doyle22
    • Peter van Heusden21
    • Nate Coraor20
    • Anne Fouilloux18
    • Bazante Sanders18
    • Julia Jakiela18
    • Anton Nekrutenko17
    • Deepti Varshney16
    • Khaled Jum'ah16
    • Lucille Delisle16
    • Pratik Jagtap13
    • Timothy J. Griffin13
    • Mélanie Petera12
    • Pablo Moreno11
    • Stéphanie Robin11
    • Katarzyna Kamieniecka10
    • Marisa Loach10
    • Matthias Bernt10
    • David López9
    • Delphine Lariviere9
    • Marie Josse9
    • Paul Zierep9
    • Simon Gladman9
    • Alexandre Cormier8
    • Dave Clements8
    • Leonid Kostrykin8
    • Mallory Freeberg8
    • Verena Moosmann8
    • Kaivan Kamali7
    • Melissa Burke7
    • Morgan Howells7
    • Anna Syme6
    • Christopher Barnett6
    • Clemens Blank6
    • Ekaterina Polkh6
    • Florian Christoph Sigloch6
    • Florian Heyl6
    • Hans-Rudolf Hotz6
    • Alireza Khanteymoori5
    • Bert Droesbeke5
    • Clea Siguret5
    • Wandrille Duchemin5
    • olisand5
    • Coline Royaux4
    • Diana Chiang Jurado4
    • Fotis E. Psomopoulos4
    • Laura Leroi4
    • Romane LIBOUBAN4
    • Solenne Correard4
    • Amirhossein Naghsh Nilchi3
    • Daniela Schneider3
    • Eli Chadwick3
    • Engy Nasr3
    • Erwan Corre3
    • Fabio Cumbo3
    • Jasper Ouwerkerk3
    • Jennifer Hillman-Jackson3
    • Joachim Wolff3
    • Krzysztof Poterlowicz3
    • Maria Christina Maniou3
    • Mateo Boudet3
    • Mateusz Kuzak3
    • Miaomiao Zhou3
    • Nadia Goué3
    • Riccardo Massei3
    • Sofoklis Keisaris3
    • Timon Schlegel3
    • Xavier Garnier3
    • Ahmed Hamid Awan2
    • Alex Ostrovsky2
    • Andrea Bagnacani2
    • Anika Erxleben2
    • Camila Goclowski2
    • Carlos Chee Mendonça2
    • Show N_FILTERS more
    • Resource type
    • e-learning5
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets5
    • Associated Workflows4
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Target audience: Students

and Contributors: Linelle Abueg

5 materials found
  • e-learning

    Pathway analysis with the MINERVA Platform

    •• intermediate
    Transcriptomics bulk cyoa rna-seq viz
  • e-learning

    Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data

    •• intermediate
    Sequence assembly Chromosome conformation capture Assembly VGP biodiversity eukaryote pacbio
  • e-learning

    Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step

    •• intermediate
    Sequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio
  • e-learning

    Building an amplicon sequence variant (ASV) table from 16S data using DADA2

    • beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy
  • e-learning

    M. tuberculosis Variant Analysis

    •• intermediate
    Genetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.