Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Algorithms4
    • Computer programming4
    • Data structures4
    • Programming languages4
    • Software development4
    • Software engineering4
    • Antimicrobial stewardship2
    • Assembly2
    • Bayesian methods2
    • Biological sequences2
    • Biostatistics2
    • Content management2
    • Data management2
    • Database management2
    • Descriptive statistics2
    • Document management2
    • Exomes2
    • File management2
    • Gaussian processes2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • Inferential statistics2
    • Informatics2
    • Information management2
    • Information science2
    • Knowledge management2
    • Markov processes2
    • Medical microbiology2
    • Metadata management2
    • Microbial genetics2
    • Microbial physiology2
    • Microbial surveillance2
    • Microbiological surveillance2
    • Microbiology2
    • Molecular infection biology2
    • Molecular microbiology2
    • Multivariate statistics2
    • Personal genomics2
    • Probabilistic graphical model2
    • Probability2
    • Record management2
    • Research data management (RDM)2
    • Sequence analysis2
    • Sequence assembly2
    • Sequence databases2
    • Statistics2
    • Statistics and probability2
    • Synthetic genomics2
    • Viral genomics2
    • Whole genomes2
    • Community analysis1
    • Comparative transcriptomics1
    • Computational ecology1
    • DNA metabarcoding1
    • DNA polymorphism1
    • DNA variation1
    • Data privacy1
    • Data security1
    • De novo genome sequencing1
    • Ecoinformatics1
    • Ecological informatics1
    • Ecology1
    • Ecosystem science1
    • Environmental metabarcoding1
    • Environmental microbiology1
    • Epidemiology1
    • Genetic variation1
    • Genome sequencing1
    • Genomic variation1
    • Metabarcoding1
    • Metagenomics1
    • Microbial ecology1
    • Microbiome1
    • Microsatellites1
    • Molecular community analysis1
    • Mutation1
    • Polymorphism1
    • Public health1
    • Public health and epidemiology1
    • RFLP1
    • RNA metabarcoding1
    • SNP1
    • Shotgun metagenomics1
    • Single nucleotide polymorphism1
    • Somatic mutations1
    • Taxonomy1
    • Transcriptome1
    • Transcriptomics1
    • VNTR1
    • Variable number of tandem repeat polymorphism1
    • WGS1
    • Whole genome resequencing1
    • Whole genome sequencing1
    • eDNA metabarcoding1
    • eRNA metabarcoding1
    • snps1
    • Show N_FILTERS more
    • Tool
    • Galaxy22
    • BWA3
    • fastp3
    • FastQC2
    • BEDTools1
    • BamTools1
    • Bandage1
    • Biopython1
    • FASTX-Toolkit1
    • Falco1
    • FreeBayes1
    • GEMINI1
    • Galactic Circos1
    • MultiQC1
    • QUAST1
    • SCANPY1
    • Salmon1
    • Targetfinder.org1
    • Vcflib1
    • bx-python1
    • ggplot21
    • kraken21
    • miRDeep21
    • scikit-learn1
    • shovill1
    • snpEff1
    • taxonomy_krona_chart1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training62
    • Show N_FILTERS more
    • Keyword
    • Galaxy Server administration40
    • ansible18
    • git-gat18
    • interactive-tools9
    • jobs5
    • Introduction to Galaxy Analyses4
    • Climate3
    • Using Galaxy and Managing your Data3
    • microgalaxy3
    • monitoring3
    • Statistics and machine learning2
    • deploying2
    • networking2
    • plants2
    • storage2
    • wireguard2
    • 10x1
    • 16S1
    • Assembly1
    • Contributing to the Galaxy Training Material1
    • Development in Galaxy1
    • Ecology1
    • Foundations of Data Science1
    • Microbiome1
    • R1
    • Single Cell1
    • Transcriptomics1
    • Variant Analysis1
    • Visualisation1
    • assembly1
    • authentication1
    • beacon1
    • biodiversity1
    • broken1
    • covid191
    • data1
    • ga4gh1
    • gbif1
    • illumina1
    • jupyter-notebook1
    • metabarcoding1
    • miRNA1
    • modeling1
    • nanopore1
    • ncbi1
    • prokaryote1
    • species populations EBV class1
    • stress tolerance1
    • systemd1
    • tools1
    • training1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner60
    • Intermediate2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International62
    • Show N_FILTERS more
    • Target audience
    • Galaxy Administrators41
    • Students20
    • Instructors1
    • Show N_FILTERS more
    • Author
    • Helena Rasche31
    • Nate Coraor16
    • Simon Gladman11
    • Björn Grüning9
    • Saskia Hiltemann6
    • Anne Fouilloux5
    • Bérénice Batut5
    • Mira Kuntz5
    • Nicola Soranzo5
    • Marius van den Beek4
    • Martin Čech4
    • Anton Nekrutenko3
    • Cristóbal Gallardo3
    • Lucille Delisle3
    • Anne Pajon2
    • Clemens Blank2
    • Daniel Blankenberg2
    • Fotis E. Psomopoulos2
    • Gianmauro Cuccuru2
    • Laila Los2
    • Pavankumar Videm2
    • Abdulrahman Azab1
    • Adelaide Rhodes1
    • Alex Ostrovsky1
    • Anthony Bretaudeau1
    • Bazante Sanders1
    • Beatriz Serrano-Solano1
    • Christopher Barnett1
    • Dave Clements1
    • Diana Chiang Jurado1
    • Dilmurat Yusuf1
    • Elisa Michon1
    • Enis Afgan1
    • Hans-Rudolf Hotz1
    • Hui Tang1
    • Jon Trow1
    • José Manuel Domínguez1
    • Kaivan Kamali1
    • Matthias Bernt1
    • Mehmet Tekman1
    • Michele Maroni1
    • Nadia Goué1
    • Nuwan Goonasekera1
    • Olha Nahorna1
    • Sarah Peter1
    • The Carpentries1
    • Toby Hodges1
    • Torfinn Nome1
    • Valentin Marcon1
    • Yvan Le Bras1
    • Show N_FILTERS more
    • Contributor
    • Nate Coraor
    • Saskia Hiltemann514
    • Helena Rasche471
    • Björn Grüning379
    • Bérénice Batut232
    • Nicola Soranzo148
    • Martin Čech114
    • Anthony Bretaudeau101
    • Cristóbal Gallardo95
    • Niall Beard81
    • Wendi Bacon71
    • Armin Dadras61
    • Gildas Le Corguillé57
    • Marius van den Beek55
    • William Durand55
    • Mehmet Tekman44
    • Simon Gladman44
    • Teresa Müller43
    • Lucille Delisle42
    • Yvan Le Bras37
    • Pavankumar Videm36
    • Wolfgang Maier35
    • Melanie Föll34
    • Beatriz Serrano-Solano32
    • Simon Bray28
    • Subina Mehta27
    • Anup Kumar25
    • Donny Vrins23
    • Maria Doyle23
    • Peter van Heusden23
    • Anne Fouilloux20
    • Julia Jakiela20
    • Bazante Sanders19
    • Anton Nekrutenko17
    • Deepti Varshney16
    • Khaled Jum'ah16
    • Mélanie Petera14
    • Pratik Jagtap13
    • Timothy J. Griffin13
    • Marie Josse12
    • Matthias Bernt12
    • Pablo Moreno12
    • David López11
    • Delphine Lariviere11
    • Gianmauro Cuccuru11
    • Marisa Loach11
    • Mira Kuntz11
    • Paul Zierep11
    • Stéphanie Robin11
    • Katarzyna Kamieniecka10
    • Alexandre Cormier8
    • Dave Clements8
    • John Chilton8
    • Leonid Kostrykin8
    • Mallory Freeberg8
    • Melissa Burke8
    • Verena Moosmann8
    • Daniel Sobral7
    • Hans-Rudolf Hotz7
    • Kaivan Kamali7
    • Morgan Howells7
    • Sabine Österle7
    • Anna Syme6
    • Bert Droesbeke6
    • Christopher Barnett6
    • Clemens Blank6
    • Eija Korpelainen6
    • Ekaterina Polkh6
    • Enis Afgan6
    • Florian Christoph Sigloch6
    • Florian Heyl6
    • Linelle Abueg6
    • Tomas Klingström6
    • Alex Ostrovsky5
    • Alireza Khanteymoori5
    • Clea Siguret5
    • John Davis5
    • Lieven Clement5
    • Wandrille Duchemin5
    • olisand5
    • Catherine Bromhead4
    • Coline Royaux4
    • Dave B.4
    • David Philip Judge4
    • Diana Chiang Jurado4
    • Eli Chadwick4
    • Fotis E. Psomopoulos4
    • Hélène Chiapello4
    • Laura Leroi4
    • Mateusz Kuzak4
    • Phil Reed4
    • Roland Krause4
    • Romane LIBOUBAN4
    • Solenne Correard4
    • Amirhossein Naghsh Nilchi3
    • Andrea Bagnacani3
    • Daniel Faria3
    • Daniel Neves3
    • Daniela Schneider3
    • Engy Nasr3
    • Show N_FILTERS more
    • Resource type
    • e-learning52
    • slides10
    • Show N_FILTERS more
    • Related resource
    • Quarto/RMarkdown Notebook39
    • Associated Training Datasets33
    • ansible18
    • git-gat18
    • Associated Workflows12
    • jobs5
    • monitoring3
    • deploying2
    • networking2
    • storage2
    • wireguard2
    • Jupyter Notebook (with Solutions)1
    • Jupyter Notebook (without Solutions)1
    • authentication1
    • beacon1
    • broken1
    • data1
    • features1
    • ga4gh1
    • interactive-tools1
    • systemd1
    • tools1
    • training1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Contributors: Nate Coraor

62 materials found
  • e-learning

    Species distribution modeling

    • beginner
    Ecology biodiversity gbif interactive-tools modeling species populations EBV class
  • e-learning

    SRA Aligned Read Format to Speed Up SARS-CoV-2 data Analysis

    • beginner
    Using Galaxy and Managing your Data covid19 ncbi
  • e-learning

    Introduction to Machine Learning using R

    •• intermediate
    Statistics and probability Statistics and machine learning interactive-tools
  • e-learning

    JupyterLab in Galaxy

    • beginner
    Using Galaxy and Managing your Data interactive-tools
  • e-learning

    Functionally Assembled Terrestrial Ecosystem Simulator (FATES) with Galaxy Climate JupyterLab

    • beginner
    Climate interactive-tools
  • e-learning

    Visualize Climate data with Panoply netCDF viewer

    • beginner
    Climate interactive-tools
  • e-learning

    RStudio in Galaxy

    • beginner
    Using Galaxy and Managing your Data interactive-tools
  • e-learning

    R basics in Galaxy

    • beginner
    Software engineering Foundations of Data Science R interactive-tools
  • e-learning

    Customizing the look of Galaxy

    • beginner
    Galaxy Server administration git-gat
  • e-learning

    Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

    • beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 7
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.