Training materials
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e-learning
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
e-learning
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x MIGHTS Single Cell jupyter-notebook paper-replication -
e-learning
Inferring single cell trajectories with Monocle3 (R)
• beginner10x MIGHTS R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
e-learning
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x MIGHTS R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
e-learning
Inferring single cell trajectories with Scanpy (Python)
• beginner10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
e-learning
Pangeo Notebook in Galaxy - Introduction to Xarray
• beginnerClimate interactive-tools jupyter-notebook pangeo -
e-learning
Python - Type annotations
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
SQL with R
•• intermediateSoftware engineering Foundations of Data Science R SQL jupyter-notebook rmarkdown-notebook -
e-learning
Python - Testing
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Conda Environments For Software Development
•• intermediateSoftware engineering Foundations of Data Science conda jupyter-notebook