Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Imaging
    • Bottom-up proteomics36
    • Discovery proteomics36
    • MS-based targeted proteomics36
    • MS-based untargeted proteomics36
    • Metaproteomics36
    • Peptide identification36
    • Protein and peptide identification36
    • Proteomics36
    • Quantitative proteomics36
    • Targeted proteomics36
    • Top-down proteomics36
    • Exomes34
    • Genome annotation34
    • Genomes34
    • Genomics34
    • Personal genomics34
    • Synthetic genomics34
    • Viral genomics34
    • Whole genomes34
    • Biological sequences29
    • Sequence analysis29
    • Sequence databases29
    • Computational ecology25
    • Ecoinformatics25
    • Ecological informatics25
    • Ecology25
    • Ecosystem science25
    • Assembly23
    • Sequence assembly23
    • Community analysis21
    • Environmental microbiology21
    • Microbial ecology21
    • Microbiome21
    • Molecular community analysis21
    • Bayesian methods20
    • Biostatistics20
    • Comparative transcriptomics20
    • Descriptive statistics20
    • Gaussian processes20
    • Inferential statistics20
    • Markov processes20
    • Multivariate statistics20
    • Probabilistic graphical model20
    • Probability20
    • Statistics20
    • Statistics and probability20
    • Transcriptome20
    • Transcriptomics20
    • Metagenomics19
    • Shotgun metagenomics19
    • Antimicrobial stewardship16
    • Medical microbiology16
    • Microbial genetics16
    • Microbial physiology16
    • Microbial surveillance16
    • Microbiological surveillance16
    • Microbiology16
    • Molecular infection biology16
    • Molecular microbiology16
    • DNA variation15
    • Genetic variation15
    • Genomic variation15
    • Mutation15
    • Polymorphism15
    • Somatic mutations15
    • Taxonomy14
    • Biodiversity11
    • Epigenomics11
    • Diffraction experiment10
    • Exometabolomics10
    • LC-MS-based metabolomics10
    • MS-based metabolomics10
    • MS-based targeted metabolomics10
    • MS-based untargeted metabolomics10
    • Mass spectrometry-based metabolomics10
    • Metabolites10
    • Metabolome10
    • Metabolomics10
    • Metabonomics10
    • Microscopy10
    • Microscopy imaging10
    • NMR-based metabolomics10
    • Optical super resolution microscopy10
    • Photonic force microscopy10
    • Photonic microscopy10
    • Algorithms6
    • Computational chemistry6
    • Computer programming6
    • Data structures6
    • Epidemiology6
    • Programming languages6
    • Public health6
    • Public health and epidemiology6
    • Software development6
    • Software engineering6
    • Communicable disease5
    • DNA metabarcoding5
    • De novo genome sequencing5
    • Environmental metabarcoding5
    • Show N_FILTERS more
    • Tool
    • Galaxy
    • Galaxy Image Analysis5
    • scikit-image5
    • CellProfiler3
    • OMERO1
    • PyTorch1
    • SCANPY1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training10
    • Show N_FILTERS more
    • Keyword
    • Imaging10
    • HeLa2
    • bioimaging2
    • AI1
    • DNA1
    • Protein1
    • RNA1
    • imageanalysis1
    • segmentation1
    • voronoi1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner8
    • Intermediate2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International10
    • Show N_FILTERS more
    • Target audience
    • Students10
    • Show N_FILTERS more
    • Author
    • Leonid Kostrykin4
    • Beatriz Serrano-Solano3
    • Diana Chiang Jurado2
    • Jean-Karim Hériché2
    • Riccardo Massei2
    • Thomas Wollmann2
    • Allison Creason1
    • Anne Fouilloux1
    • Cameron Watson1
    • Even Moa Myklebust1
    • Reyhaneh Tavakoli1
    • Saskia Hiltemann1
    • Yi Sun1
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann
    • Leonid Kostrykin10
    • Björn Grüning9
    • Beatriz Serrano-Solano7
    • Helena Rasche6
    • Diana Chiang Jurado3
    • Riccardo Massei3
    • Anne Fouilloux2
    • Cristóbal Gallardo2
    • Thomas Wollmann2
    • Anup Kumar1
    • Armin Dadras1
    • Cameron Watson1
    • Even Moa Myklebust1
    • Martin Čech1
    • Reyhaneh Tavakoli1
    • Yi Sun1
    • Show N_FILTERS more
    • Resource type
    • e-learning9
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows9
    • Associated Training Datasets7
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Contributors: Saskia Hiltemann

and Scientific topics: Imaging

and Tools: Galaxy

10 materials found
  • e-learning

    Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools

    • beginner
    Imaging DNA Protein RNA bioimaging
  • e-learning

    Voronoi segmentation

    • beginner
    Imaging imageanalysis segmentation voronoi
  • e-learning

    Using BioImage.IO models for image analysis in Galaxy

    • beginner
    Imaging AI bioimaging
  • e-learning

    Overview of the Galaxy OMERO-suite - Upload images and metadata in OMERO using Galaxy

    •• intermediate
    Imaging
  • e-learning

    Analyse HeLa fluorescence siRNA screen

    •• intermediate
    Imaging HeLa
  • e-learning

    Introduction to Image Analysis using Galaxy

    • beginner
    Imaging HeLa
  • e-learning

    Object tracking using CellProfiler

    • beginner
    Imaging
  • e-learning

    Nucleoli segmentation and feature extraction using CellProfiler

    • beginner
    Imaging
  • e-learning

    End-to-End Tissue Microarray Image Analysis with Galaxy-ME

    • beginner
    Imaging
  • slides

    Nucleoli Segmentation <br> & <br> Feature Extraction <br> using CellProfiler

    • beginner
    Imaging
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.