Training materials
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e-learning
Enable upload via FTP
• beginnerGalaxy Server administration data git-gat -
e-learning
Galaxy Monitoring with Reports
• beginnerGalaxy Server administration ansible broken git-gat monitoring -
e-learning
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
e-learning
Training Infrastructure as a Service (TIaaS)
• beginnerGalaxy Server administration ansible git-gat jobs training -
e-learning
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy … -
e-learning
Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
•• intermediateSequence assembly Assembly biodiversity covid19 -
e-learning
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
e-learning
Performant Uploads with TUS
• beginnerGalaxy Server administration -
e-learning
Reference Data with CVMFS without Ansible
• beginnerGalaxy Server administration -
e-learning
Galaxy Database schema
• beginnerGalaxy Server administration
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