Training materials
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e-learning
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
e-learning
Binning of metagenomic sequencing data
• beginnerMetagenomics Microbial ecology Sequence assembly Microbiome binning metagenomics microgalaxy -
e-learning
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• intermediateGenetic variation Variant Analysis covid19 one-health virology -
e-learning
Classification in Machine Learning
• beginnerStatistics and probability Statistics and machine learning -
e-learning
ERGA post-assembly QC
• beginnerSequence assembly Assembly QC animals assembly genome plants -
e-learning
Deep Learning (Part 3) - Convolutional neural networks (CNN)
• beginnerStatistics and probability Statistics and machine learning -
e-learning
Clustering 3K PBMCs with Scanpy
• beginner10x Single Cell -
e-learning
From peaks to genes
• beginnerIntroduction to Galaxy Analyses -
e-learning
Visualization of RNA-Seq results with Volcano Plot
• beginnerTranscriptomics -
e-learning
Galaxy Basics for genomics
• beginnerIntroduction to Galaxy Analyses