Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Sequence databases
    • Assembly3
    • DNA variation3
    • Epidemiology3
    • Genetic variation3
    • Genomic variation3
    • Mutation3
    • Polymorphism3
    • Public health3
    • Public health and epidemiology3
    • Sequence assembly3
    • Somatic mutations3
    • Antimicrobial stewardship2
    • Biological sequences2
    • Comparative transcriptomics2
    • Exomes2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • Medical microbiology2
    • Microbial genetics2
    • Microbial physiology2
    • Microbial surveillance2
    • Microbiological surveillance2
    • Microbiology2
    • Molecular infection biology2
    • Molecular microbiology2
    • Personal genomics2
    • Sequence analysis2
    • Synthetic genomics2
    • Transcriptome2
    • Transcriptomics2
    • Viral genomics2
    • Whole genomes2
    • Communicable disease1
    • Community analysis1
    • De novo genome sequencing1
    • Disease1
    • Environmental microbiology1
    • Genome sequencing1
    • Infectious disease1
    • Metagenomics1
    • Microbial ecology1
    • Microbiome1
    • Molecular community analysis1
    • Pathology1
    • Shotgun metagenomics1
    • Taxonomy1
    • Transmissible disease1
    • WGS1
    • Whole genome resequencing1
    • Whole genome sequencing1
    • Show N_FILTERS more
    • Tool
    • FastQC
    • Galaxy5
    • NanoPlot2
    • SAMtools2
    • fastp2
    • kraken22
    • ABRicate1
    • BCFtools1
    • BEDTools1
    • BLAST1
    • BWA1
    • BamTools1
    • Bandage1
    • Bracken1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • Cutadapt1
    • FASTQE1
    • Falco1
    • FastTree1
    • Flye1
    • KrakenTools1
    • MAFFT1
    • MLST1
    • Medaka1
    • Minimap21
    • MultiQC1
    • Newick Utilities1
    • Recentrifuge1
    • Trimmomatic1
    • compute_sequence_length1
    • ggplot21
    • pycoQC1
    • seqtk1
    • taxonomy_krona_chart1
    • varVAMP1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training2
    • Show N_FILTERS more
    • Keyword
    • Heatmap1
    • Microbiome1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • Sequence analysis1
    • cyoa1
    • microgalaxy1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International2
    • Show N_FILTERS more
    • Target audience
    • Students2
    • Show N_FILTERS more
    • Author
    • Bérénice Batut2
    • Alexandre Cormier1
    • Anthony Bretaudeau1
    • Cameron Hyde1
    • Engy Nasr1
    • Erwan Corre1
    • Laura Leroi1
    • Maria Doyle1
    • Paul Zierep1
    • Stéphanie Robin1
    • Show N_FILTERS more
    • Contributor
    • Wolfgang Maier
    • Bérénice Batut8
    • Helena Rasche8
    • Saskia Hiltemann7
    • Björn Grüning4
    • Cristóbal Gallardo4
    • Anthony Bretaudeau3
    • Nicola Soranzo3
    • Paul Zierep3
    • William Durand3
    • Alexandre Cormier2
    • Christine Oger2
    • Engy Nasr2
    • Mateo Boudet2
    • Natalie Kucher2
    • Niall Beard2
    • Swathi Nataraj2
    • Teresa Müller2
    • Alex Ostrovsky1
    • Anika Erxleben1
    • Anne Fouilloux1
    • Anton Nekrutenko1
    • Anup Kumar1
    • Ava Hoffman1
    • Candace Savonen1
    • Deepti Varshney1
    • Elizabeth Humphries1
    • Frederick Tan1
    • Gildas Le Corguillé1
    • Hans-Rudolf Hotz1
    • Katherine Cox1
    • Maria Doyle1
    • Matthias Bernt1
    • Mélanie Petera1
    • Nate Coraor1
    • Nuwan Goonasekera1
    • Simon Bray1
    • Siyu Chen1
    • Vijay1
    • Show N_FILTERS more
    • Resource type
    • e-learning2
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets2
    • Associated Workflows2
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Sequence databases

and Tools: FastQC

and Contributors: Wolfgang Maier

2 materials found
  • e-learning

    Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

    • beginner
    Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
  • e-learning

    Quality Control

    • beginner
    Sequence analysis
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.