Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Biological sequences4
    • Metagenomics4
    • Sequence analysis4
    • Sequence databases4
    • Shotgun metagenomics4
    • Community analysis3
    • Comparative transcriptomics3
    • Environmental microbiology3
    • Microbial ecology3
    • Microbiome3
    • Molecular community analysis3
    • Transcriptome3
    • Transcriptomics3
    • Exomes2
    • Function analysis2
    • Functional analysis2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • Metatranscriptomics2
    • Personal genomics2
    • Protein function analysis2
    • Protein function prediction2
    • Synthetic genomics2
    • Taxonomy2
    • Viral genomics2
    • Whole genomes2
    • Assembly1
    • Computational ecology1
    • Ecoinformatics1
    • Ecological informatics1
    • Ecology1
    • Ecosystem science1
    • Sequence assembly1
    • Show N_FILTERS more
    • Tool
    • Cutadapt
    • Galaxy257
    • FastQC29
    • SAMtools21
    • MultiQC18
    • scikit-learn15
    • BEDTools14
    • BWA14
    • SCANPY13
    • Data Stewardship Wizard12
    • fastp12
    • BLAST11
    • DeepTools11
    • taxonomy_krona_chart9
    • Falco8
    • FreeBayes8
    • GEMINI8
    • FASTX-Toolkit7
    • NanoPlot7
    • STAR7
    • ggplot27
    • kraken27
    • BamTools6
    • Bandage6
    • Galaxy Image Analysis6
    • JBrowse6
    • QUAST6
    • Trimmomatic6
    • scikit-image6
    • Biopython5
    • Bowtie 25
    • HISAT25
    • MetaPhlAn5
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • Chipster4
    • Diamond4
    • Flye4
    • HUMAnN24
    • KrakenTools4
    • MACS4
    • MaxQuant4
    • Minimap24
    • RStudio4
    • Workflow4Metabolomics4
    • anndata4
    • annotatemyids4
    • mothur4
    • snpEff4
    • BCFtools3
    • BUSCO3
    • Bracken3
    • Bwa-mem23
    • CellProfiler3
    • Clustal 1.8 (Clustal W, Clustal X)3
    • DropletUtils3
    • GOseq3
    • Galactic Circos3
    • GraPhlAn3
    • MAFFT3
    • MSstats3
    • Newick Utilities3
    • R3
    • RSeQC3
    • Salmon3
    • SeqCode3
    • SortMeRNA3
    • Stacks3
    • StringTie3
    • Trim Galore3
    • bx-python3
    • export2graphlan3
    • gffcompare3
    • humann3
    • msConvert3
    • seqtk3
    • xcms3
    • Bakta2
    • BridgeDbR2
    • Cardinal2
    • ChIPpeakAnno2
    • CheckM2
    • DESeq22
    • FASTQE2
    • FastTree2
    • GECKO2
    • GOEnrichment2
    • GenomeScope 2.02
    • Heinz2
    • InterMine2
    • InterMineR2
    • InterProScan (EBI)2
    • JBrowse 22
    • MAGeCK2
    • MEGAHIT2
    • MEME2
    • Medaka2
    • Merqury2
    • Ontology Lookup Service2
    • Open Babel2
    • Racon2
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training12
    • Show N_FILTERS more
    • Keyword
    • Microbiome3
    • Transcriptomics3
    • microgalaxy3
    • Genome Annotation2
    • QC2
    • Sequence analysis2
    • collections2
    • metatranscriptomics2
    • Assembly1
    • CRISPR1
    • Ecology1
    • assembly1
    • bulk1
    • cell line1
    • cyoa1
    • drosophila1
    • essential genes1
    • genome editing1
    • metagenomics1
    • mouse1
    • rna-seq1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner
    • Intermediate2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International12
    • Show N_FILTERS more
    • Target audience
    • Students12
    • Show N_FILTERS more
    • Author
    • Bérénice Batut7
    • Maria Doyle5
    • Pratik Jagtap3
    • Saskia Hiltemann3
    • Subina Mehta3
    • Alexandre Cormier2
    • Anthony Bretaudeau2
    • Emma Leith2
    • Erwan Corre2
    • Laura Leroi2
    • Praveen Kumar2
    • Ray Sajulga2
    • Stéphanie Robin2
    • Anika Erxleben1
    • Belinda Phipson1
    • Cameron Hyde1
    • Clemens Blank1
    • Daniel Maticzka1
    • Engy Nasr1
    • Florian Heyl1
    • Harriet Dashnow1
    • Kenji Fujihara1
    • Lucille Delisle1
    • Mallory Freeberg1
    • Mo Heydarian1
    • Najat Amoukou1
    • Nicola Soranzo1
    • Paul Zierep1
    • Pavankumar Videm1
    • Peter van Heusden1
    • Polina Polunina1
    • Sylvia Mahara1
    • Twishi Gulati1
    • Yvan Le Bras1
    • Show N_FILTERS more
    • Contributor
    • Helena Rasche11
    • Saskia Hiltemann11
    • Bérénice Batut8
    • Björn Grüning7
    • Nicola Soranzo5
    • Cristóbal Gallardo4
    • Anthony Bretaudeau3
    • Maria Doyle3
    • Niall Beard3
    • William Durand3
    • Wolfgang Maier3
    • Alexandre Cormier2
    • Anika Erxleben2
    • Gildas Le Corguillé2
    • Lucille Delisle2
    • Mateo Boudet2
    • Mehmet Tekman2
    • Paul Zierep2
    • Simon Bray2
    • Swathi Nataraj2
    • Amirhossein Naghsh Nilchi1
    • Anne Fouilloux1
    • Anup Kumar1
    • Armin Dadras1
    • Clea Siguret1
    • Clemens Blank1
    • Ekaterina Polkh1
    • Engy Nasr1
    • Florian Heyl1
    • Graeme Tyson1
    • Hans-Rudolf Hotz1
    • Marius van den Beek1
    • Martin Čech1
    • Matthias Bernt1
    • Natalie Kucher1
    • Pauline Seguineau1
    • Pavankumar Videm1
    • Polina Polunina1
    • Subina Mehta1
    • Teresa Müller1
    • Verena Moosmann1
    • Yvan Le Bras1
    • Show N_FILTERS more
    • Resource type
    • e-learning9
    • slides3
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets11
    • Associated Workflows11
    • Show N_FILTERS more
  • Hide disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: Cutadapt

and Difficulty level: Beginner

and Include disabled: true

12 materials found
  • e-learning

    Data submission using ENA upload Tool

    • beginner
    Ecology
  • e-learning

    CRISPR screen analysis

    • beginner
    Genomics CRISPR Genome Annotation cell line essential genes genome editing
  • e-learning

    1: RNA-Seq reads to counts

    • beginner
    Transcriptomics QC collections mouse
  • e-learning

    Metatranscriptomics analysis using microbiome RNA-seq data (short)

    • beginner
    Metagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy
  • e-learning

    Metatranscriptomics analysis using microbiome RNA-seq data

    • beginner
    Metagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy
  • e-learning

    Assembly of metagenomic sequencing data

    • beginner
    Sequence assembly Metagenomics Assembly assembly metagenomics microgalaxy
  • e-learning

    CLIP-Seq data analysis from pre-processing to motif detection

    • beginner
    Transcriptomics
  • slides

    Introduction to CRISPR screen analysis

    • beginner
    Genomics Genome Annotation
  • slides

    Introduction to metatranscriptomics

    • beginner
    Metagenomics Microbial ecology Microbiome
  • e-learning

    Quality Control

    • beginner
    Sequence analysis
  • 1
  • 2
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.