Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Community analysis7
    • Environmental microbiology7
    • Metagenomics7
    • Microbial ecology7
    • Microbiome7
    • Molecular community analysis7
    • Shotgun metagenomics7
    • Taxonomy4
    • Biological sequences3
    • Sequence analysis3
    • Sequence databases3
    • Assembly2
    • Sequence assembly2
    • DNA metabarcoding1
    • Environmental metabarcoding1
    • Metabarcoding1
    • RNA metabarcoding1
    • eDNA metabarcoding1
    • eRNA metabarcoding1
    • Show N_FILTERS more
    • Tool
    • Galaxy5
    • KrakenTools3
    • FastQC2
    • MEGAHIT2
    • kraken22
    • taxonomy_krona_chart2
    • BamTools1
    • Bandage1
    • Bowtie 21
    • Bracken1
    • CheckM1
    • CoverM1
    • Cutadapt1
    • MetaPhlAn1
    • NGSUtils1
    • QUAST1
    • fastp1
    • metaspades1
    • seqtk1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training7
    • Show N_FILTERS more
    • Keyword
    • metagenomics
    • Galaxy Server administration55
    • training52
    • Single Cell37
    • data management34
    • microgalaxy33
    • biodiversity32
    • Foundations of Data Science31
    • jupyter-notebook29
    • Ecology27
    • Statistics and machine learning27
    • Proteomics26
    • Transcriptomics26
    • Development in Galaxy25
    • Contributing to the Galaxy Training Material24
    • Microbiome22
    • FAIR Data, Workflows, and Research20
    • FAIR data19
    • ansible19
    • genes and genomes19
    • Genome Annotation18
    • Using Galaxy and Managing your Data18
    • git-gat18
    • FAIR17
    • Climate16
    • Teaching and Hosting Galaxy training16
    • interactive-tools16
    • earth-system15
    • fair15
    • Assembly14
    • Imaging14
    • Introduction to Galaxy Analyses14
    • reproducibility14
    • Data management planning13
    • Data analysis13
    • Epigenetics13
    • data stewardship13
    • medicine and health13
    • next generation sequencing13
    • Roslin Institute12
    • paper-replication12
    • transcriptomics12
    • work-in-progress12
    • Data management plan11
    • MIGHTS11
    • Sequence analysis11
    • Variant Analysis11
    • ocean10
    • plants10
    • prokaryote10
    • services and resources10
    • data visualisation9
    • label-free9
    • programming9
    • Evolution8
    • Galaxy Community Building8
    • Metabolomics8
    • alan bridge group8
    • cyoa8
    • gmod8
    • mark ibberson group8
    • Babraham Institute7
    • DDA7
    • EBV dataset7
    • EBV workflow7
    • Metadata7
    • Ontologies7
    • bioimaging7
    • dmp7
    • elixir7
    • environmental science7
    • jbrowse17
    • machine learning7
    • workflows7
    • Data management planning6
    • EeLP6
    • Workflows6
    • assembly6
    • basic research6
    • bioinformatics6
    • database curation6
    • deploying6
    • eLearning6
    • experimental biology6
    • infectious disease6
    • marc robinson-rechavi group6
    • nanopore6
    • proteins and proteomes6
    • ro-crate6
    • storage6
    • torsten schwede & thierry sengstag group6
    • train-the-trainers6
    • 10x5
    • 16S5
    • Clinical data5
    • DMP5
    • ELIXIR-CONVERGE5
    • Standards5
    • biostatistics5
    • covid195
    • Show N_FILTERS more
    • Difficulty level
    • Beginner
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International7
    • Show N_FILTERS more
    • Target audience
    • Students7
    • Show N_FILTERS more
    • Author
    • Bérénice Batut4
    • Paul Zierep2
    • Polina Polunina2
    • Sophia Hampe2
    • Fabio Cumbo1
    • Fotis E. Psomopoulos1
    • Nikos Pechlivanis1
    • QIIME21
    • Siyu Chen1
    • Teresa Müller1
    • Show N_FILTERS more
    • Contributor
    • Bérénice Batut5
    • Saskia Hiltemann5
    • Helena Rasche4
    • Teresa Müller4
    • Björn Grüning2
    • Cristóbal Gallardo2
    • Deepti Varshney2
    • Paul Zierep2
    • Daniel Blankenberg1
    • Nikos Pechlivanis1
    • Nuwan Goonasekera1
    • Polina Polunina1
    • Siyu Chen1
    • Sophia Hampe1
    • Tarnima Omara1
    • Show N_FILTERS more
    • Resource type
    • e-learning7
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets6
    • Associated Workflows4
    • Quarto/RMarkdown Notebook1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Difficulty level: Beginner

and Keywords: metagenomics

7 materials found
  • e-learning

    Indexing and profiling microbes with MetaSBT

    • beginner
    Metagenomics Microbial ecology Taxonomy Microbiome diversity metagenomics taxonomic profiling
  • e-learning

    QIIME 2 Moving Pictures

    • beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding Microbiome diversity metagenomics microgalaxy taxonomic profiling
  • e-learning

    Calculating α and β diversity from microbiome taxonomic data

    • beginner
    Metagenomics Microbial ecology Microbiome diversity metagenomics
  • e-learning

    Identification of the micro-organisms in a beer using Nanopore sequencing

    • beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Microbiome beer citizen science metagenomics microgalaxy nanopore
  • e-learning

    Taxonomic Profiling and Visualization of Metagenomic Data

    • beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Microbiome metagenomics microgalaxy taxonomic profiling
  • e-learning

    Binning of metagenomic sequencing data

    • beginner
    Metagenomics Microbial ecology Sequence assembly Microbiome binning metagenomics microgalaxy
  • e-learning

    Assembly of metagenomic sequencing data

    • beginner
    Metagenomics Microbial ecology Sequence assembly Microbiome assembly metagenomics microgalaxy
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.