TeSS Sandbox (Training eSupport System)

Filter Clear filters
- Tool
- BEDTools
- Galaxy257
- FastQC29
- SAMtools21
- MultiQC18
- scikit-learn15
- BWA14
- SCANPY13
- Cutadapt12
- Data Stewardship Wizard12
- fastp12
- BLAST11
- DeepTools11
- taxonomy_krona_chart9
- Falco8
- FreeBayes8
- GEMINI8
- FASTX-Toolkit7
- NanoPlot7
- STAR7
- ggplot27
- kraken27
- BamTools6
- Bandage6
- Galaxy Image Analysis6
- JBrowse6
- QUAST6
- Trimmomatic6
- scikit-image6
- Biopython5
- Bowtie 25
- HISAT25
- MetaPhlAn5
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
- Chipster4
- Diamond4
- Flye4
- HUMAnN24
- KrakenTools4
- MACS4
- MaxQuant4
- Minimap24
- RStudio4
- Workflow4Metabolomics4
- anndata4
- annotatemyids4
- mothur4
- snpEff4
- BCFtools3
- BUSCO3
- Bracken3
- Bwa-mem23
- CellProfiler3
- Clustal 1.8 (Clustal W, Clustal X)3
- DropletUtils3
- GOseq3
- Galactic Circos3
- GraPhlAn3
- MAFFT3
- MSstats3
- Newick Utilities3
- R3
- RSeQC3
- Salmon3
- SeqCode3
- SortMeRNA3
- Stacks3
- StringTie3
- Trim Galore3
- bx-python3
- export2graphlan3
- gffcompare3
- humann3
- msConvert3
- seqtk3
- xcms3
- Bakta2
- BridgeDbR2
- Cardinal2
- ChIPpeakAnno2
- CheckM2
- DESeq22
- FASTQE2
- FastTree2
- GECKO2
- GOEnrichment2
- GenomeScope 2.02
- Heinz2
- InterMine2
- InterMineR2
- InterProScan (EBI)2
- JBrowse 22
- MAGeCK2
- MEGAHIT2
- MEME2
- Medaka2
- Merqury2
- Ontology Lookup Service2
- Open Babel2
- Racon2
- Show N_FILTERS more
- Content provider
- Galaxy Training14
- Show N_FILTERS more
- Keyword
- Epigenetics6
- Transcriptomics3
- ChIP-seq2
- microgalaxy2
- 10x1
- Assembly1
- Genome Annotation1
- Heatmap1
- Introduction to Galaxy Analyses1
- Microbiome1
- Nanopore data analysis1
- Pathogens detection1
- Phylogenetic tree1
- Single Cell1
- biodiversity1
- cyoa1
- epigenetics1
- eukaryote1
- gmod1
- jbrowse11
- prokaryote1
- Show N_FILTERS more
- Difficulty level
- Beginner
- Intermediate1
- Show N_FILTERS more
- Target audience
- Students14
- Show N_FILTERS more
- Resource type
- e-learning12
- slides2
- Show N_FILTERS more
- Related resource
- Associated Training Datasets14
- Associated Workflows14
- Show N_FILTERS more
Show disabled materials
Show archived materials
- Date added
- In the last 24 hours
- In the last 1 week
- In the last 1 month

Training materials

Tools: BEDTools

and Difficulty level: Beginner

14 materials found

Filter

Sort

Filter Clear filters

Training materials

CUT&RUN data analysis

Introduction to ATAC-Seq data analysis

ChIP-seq data analysis

Galaxy Basics for genomics