Filters

• Sort

• • Most recent Last modified Title descending Title ascending

• Filter Clear filters

• • Scientific topic
  • Algorithms65
  • Computer programming65
  • Data structures65
  • Programming languages65
  • Software development65
  • Software engineering65
  • Data management64
  • Metadata management64
  • FAIR data39
  • Findable, accessible, interoperable, reusable data39
  • Biological sequences30
  • Sequence analysis30
  • Sequence databases30
  • Community analysis26
  • Environmental microbiology26
  • Microbial ecology26
  • Microbiome26
  • Molecular community analysis26
  • Metagenomics25
  • Shotgun metagenomics25
  • Bayesian methods24
  • Biostatistics24
  • Comparative transcriptomics24
  • Descriptive statistics24
  • Gaussian processes24
  • Inferential statistics24
  • Markov processes24
  • Multivariate statistics24
  • Probabilistic graphical model24
  • Probability24
  • Statistics24
  • Statistics and probability24
  • Transcriptome24
  • Transcriptomics24
  • Computational ecology22
  • Ecoinformatics22
  • Ecological informatics22
  • Ecology22
  • Ecosystem science22
  • Assembly18
  • Sequence assembly18
  • Exomes17
  • Genome annotation17
  • Genomes17
  • Genomics17
  • Personal genomics17
  • Synthetic genomics17
  • Viral genomics17
  • Whole genomes17
  • Antimicrobial stewardship15
  • Medical microbiology15
  • Microbial genetics15
  • Microbial physiology15
  • Microbial surveillance15
  • Microbiological surveillance15
  • Microbiology15
  • Molecular infection biology15
  • Molecular microbiology15
  • Epigenomics13
  • Taxonomy13
  • Bottom-up proteomics12
  • DNA variation12
  • Diffraction experiment12
  • Discovery proteomics12
  • Genetic variation12
  • Genomic variation12
  • Imaging12
  • MS-based targeted proteomics12
  • MS-based untargeted proteomics12
  • Metaproteomics12
  • Microscopy12
  • Microscopy imaging12
  • Mutation12
  • Optical super resolution microscopy12
  • Peptide identification12
  • Photonic force microscopy12
  • Photonic microscopy12
  • Polymorphism12
  • Protein and peptide identification12
  • Proteomics12
  • Quantitative proteomics12
  • Somatic mutations12
  • Targeted proteomics12
  • Top-down proteomics12
  • Applied ontology10
  • Cloud computing10
  • Computer science10
  • HPC10
  • High performance computing10
  • High-performance computing10
  • Ontologies10
  • Ontology10
  • Ontology and terminology10
  • Ontology relations10
  • Terminology10
  • Upper ontology10
  • Bioinformatics9
  • Exometabolomics9
  • LC-MS-based metabolomics9
  • MS-based metabolomics9
  • Show N_FILTERS more
• • Operation
  • Data handling44
  • File handling44
  • File processing44
  • Processing44
  • Report handling44
  • Utility operation44
  • Data extraction11
  • Data retrieval11
  • Data retrieval (metadata)11
  • Metadata retrieval11
  • Retrieval11
  • Analysis10
  • Data deposition7
  • Data submission7
  • Database deposition7
  • Database submission7
  • Deposition7
  • Submission7
  • Database retrieval5
  • Query5
  • Query and retrieval5
  • Data visualisation2
  • Database search2
  • Molecular visualisation2
  • Normalisation2
  • Ontology browsing2
  • Ontology visualisation2
  • Plotting2
  • Rendering2
  • Search2
  • Standardisation2
  • Standardisation and normalisation2
  • Visualisation2
  • Alignment1
  • Alignment construction1
  • Alignment generation1
  • Allele calling1
  • Annotation1
  • Editing1
  • Exome variant detection1
  • File format conversion1
  • File formatting1
  • File reformatting1
  • Filtering1
  • Format conversion1
  • Formatting1
  • Genome variant detection1
  • Germ line variant calling1
  • Image analysis1
  • Mathematical modelling1
  • Modelling and simulation1
  • Mutation detection1
  • RNA-Seq analysis1
  • Read pre-processing1
  • Reformatting1
  • Sequence filtering1
  • Sequence read pre-processing1
  • Somatic variant calling1
  • Variant calling1
  • Variant mapping1
  • de novo mutation detection1
  • rRNA filtering1
  • Show N_FILTERS more
• • Tool
  • Data Stewardship Wizard13
  • Chipster4
  • RStudio4
  • BridgeDbR2
  • InterMine2
  • InterMineR2
  • Ontology Lookup Service2
  • PathVisio2
  • Zooma2
  • BridgeDb1
  • BridgeDb API1
  • ChEBI1
  • DISEASES1
  • DataDiscovery1
  • Datanator1
  • R1
  • REDCap1
  • STITCH1
  • STRING1
  • V-pipe1
  • WheatIS1
  • Wikidata1
  • bio.tools1
  • edgeR1
  • runBioSimulations1
  • tidybulk1
  • Show N_FILTERS more
• • Standard database or policy
  • Minimum Information about Plant Phenotyping Experiment2
  • OBO Foundry2
  • Wheat Data Interoperability Guidelines 1
  • Bioschemas1
  • Chemical Entities of Biological Interest1
  • Common Workflow Language1
  • Crop Ontology1
  • Datanator1
  • Ensembl1
  • FAIRsharing1
  • IUPAC International Chemical Identifier1
  • Identifiers.org Registry1
  • MDL molfile Format1
  • Multi-Crop Passport Descriptors1
  • Plant Phenotype Experiment Ontology1
  • STRING: functional protein association networks1
  • Schema.org1
  • Search Tool for Interactions of Chemicals1
  • Simplified Molecular Input Line Entry Specification Format1
  • The Human Metabolome Database1
  • Wheat Trait Ontology1
  • Wikidata1
  • data.eNanoMapper.net1
  • eNanoMapper Ontology1
  • Show N_FILTERS more
• • Content provider
  • Galaxy Training440
  • Finn's Test Provider34
  • DTLS - Dutch Techcentre For Life Sciences31
  • Bioinformatics and Biomathematics Training Hub29
  • Swiss Institute of Bioinformatics11
  • CINECA PROJECT9
  • ELIXIR Brazil9
  • CSC - IT Center for Science8
  • IFB French Institute of Bioinformatics8
  • Centre for Digital Life Norway7
  • Department of Bioinformatics - BiGCaT, Maastricht University6
  • ELIXIR Luxembourg5
  • ELIXIR Portugal5
  • ELIXIR-SI eLearning Platform (EeLP)5
  • NanoCommons4
  • University of Cambridge Bioinformatics Training4
  • Barcelona Supercomputing Center (BSC)3
  • European Bioinformatics Institute (EBI)3
  • COG-Train2
  • InterMine2
  • VIB Bioinformatics Core2
  • ELIXIR Norway1
  • ELIXIR Slovenia1
  • FAIRsharing1
  • Novo Nordisk Foundation Center for Protein Research1
  • Test Provider1
  • de.NBI1
  • eNanoMapper1
  • Show N_FILTERS more
• • Keyword
  • Galaxy Server administration51
  • Single Cell34
  • Foundations of Data Science32
  • microgalaxy30
  • jupyter-notebook29
  • data management27
  • Development in Galaxy25
  • Transcriptomics25
  • training25
  • Microbiome24
  • Ecology22
  • Contributing to the Galaxy Training Material21
  • FAIR Data, Workflows, and Research19
  • FAIR data19
  • Statistics and machine learning19
  • ansible19
  • FAIR18
  • git-gat18
  • Using Galaxy and Managing your Data17
  • Teaching and Hosting Galaxy training16
  • 10x15
  • Genome Annotation15
  • fair15
  • Climate14
  • data stewardship14
  • interactive-tools14
  • Data management planning13
  • Assembly13
  • Data analysis13
  • Epigenetics13
  • Introduction to Galaxy Analyses13
  • Proteomics12
  • Roslin Institute12
  • paper-replication12
  • Data management plan11
  • MIGHTS11
  • Variant Analysis11
  • earth-system10
  • prokaryote10
  • Metabolomics9
  • Sequence analysis9
  • gmod9
  • plants9
  • EBV workflow8
  • Imaging8
  • cyoa8
  • genes and genomes8
  • jbrowse18
  • Babraham Institute7
  • DDA7
  • EBV dataset7
  • Evolution7
  • Ontologies7
  • dmp7
  • ocean7
  • reproducibility7
  • transcriptomics7
  • DMP6
  • EeLP6
  • Metadata6
  • Standards6
  • Workflows6
  • assembly6
  • eLearning6
  • metagenomics6
  • nanopore6
  • workflows6
  • 16S5
  • Clinical data5
  • Data management planning5
  • ELIXIR-CONVERGE5
  • JIC5
  • John Innes Centre5
  • covid195
  • data management plan5
  • data sharing5
  • data visualisation5
  • illumina5
  • jobs5
  • label-TMT115
  • metabarcoding5
  • next generation sequencing5
  • programming5
  • ro-crate5
  • Data collection4
  • Data preserving4
  • Data sharing4
  • Bioinformatics4
  • DMP tools4
  • Data preserving4
  • FAIR principles4
  • Genetic composition EBV class4
  • Python4
  • QC4
  • R4
  • RDF4
  • Rare Diseases & Research4
  • Sequencing4
  • Visualisation4
  • bacteria4
  • Show N_FILTERS more
• • Difficulty level
  • Beginner
  • Not specified1157
  • Intermediate171
  • Advanced35
  • Show N_FILTERS more
• • Licence
  • Creative Commons Attribution 4.0 International496
  • License Not Specified71
  • Creative Commons Attribution Share Alike 4.0 International30
  • Other (Not Open)17
  • Creative Commons Attribution Non Commercial Share Alike 4.0 International12
  • Creative Commons Attribution Non Commercial No Derivatives 4.0 International8
  • Other (Non-Commercial)8
  • Creative Commons Attribution Non Commercial 4.0 International5
  • Apache License 2.04
  • Creative Commons Zero v1.0 Universal4
  • MIT License4
  • Other (Open)2
  • Creative Commons Attribution No Derivatives 4.0 International1
  • GNU General Public License v2.0 only1
  • GNU General Public License v3.0 only1
  • Show N_FILTERS more
• • Target audience
  • Students325
  • Galaxy Administrators76
  • Instructors39
  • PhD candidate27
  • Researchers26
  • Biologists21
  • PhD students17
  • Life Science Researchers16
  • bioinformaticians14
  • PhD candidates9
  • Bioinformaticians8
  • Master students7
  • data stewards6
  • All postgraduates5
  • Biomedical Researchers5
  • Biomedical researchers5
  • Data Managers5
  • Data Scientists5
  • Research Scientists5
  • Trainers5
  • Chemists4
  • Life scientists4
  • Post Docs4
  • Professors4
  • Training Designers4
  • Training instructors4
  • biologists4
  • Academia/ Research Institution3
  • Healthcare3
  • Industry3
  • Non-Profit Organisation3
  • Patient Advocates 3
  • data steward / data manager3
  • life scientists3
  • rare disease patients representatives2
  • Anyone interested in data standardization and/or the ontology approach (i.e. public, end users).2
  • Bench biologists2
  • Biologists, Genomicists, Computer Scientists2
  • Computational biologists2
  • Laboratory technicians2
  • PhD2
  • Policy makers2
  • Scientists2
  • Staff2
  • Undergraduate students2
  • Veterinarians2
  • biocurators2
  • computational scientists2
  • data manager2
  • data managers2
  • database managers2
  • modelers2
  • policy officer2
  • post-docs2
  • project manager2
  • software developers, bioinformaticians2
  • Any students, postdocs or RAs who have an interest in bioinformatics and who intend to carry out statistical analysis of their experimental data using R. This two day course is planned to be a very gentle introduction to the very basic concepts of R.1
  • Any students, postdocs or RAs who have an interest in bioinformatics and who intend to conduct their own analyses on a Linux platform. Those intending to register for the upcoming Introduction to HPC course are very strongly encouraged to attend this short (two morning) course and it should be seen as a prerequisite for later courses to be offered on ChIP-Seq analysis and command line/Galaxy implementations of NGS workflows.1
  • Any students, postdocs or RAs who have an interest in programming and who intend to carry out computational analysis of their experimental data. Perl is often used for preparing input files for more specialized software such as R, and also to post-process the output from R and various other bioinformatics tools. It is a glue language allowing you to build pipelines of analyses of arbitrary complexity. This two day course is planned to be a gentle introduction to the basic concepts of Perl and will also introduce you to the BioPerl library of modules.1
  • Anyone1
  • Beginners1
  • Biochemists1
  • Bioimage Analysts1
  • Biophysicists1
  • Cloud users1
  • Computer Vision scientists1
  • Curators1
  • Developers1
  • For beginners interested in using Python to solve problems in Biology.1
  • General Interest1
  • Graduate students1
  • IT support1
  • Image Analysts1
  • Life sciences1
  • Microbiologists1
  • Microscopists1
  • PhD students, computer scientists, bioinformaticians and developers who need to maintain/extend existing tools or develop new tools for Galaxy. 1
  • Post-Doctoral Fellows1
  • Postdoctoral researcher1
  • Postgraduate students1
  • Professor1
  • Public Health Professionals1
  • Python for Biologists1
  • Researcher1
  • Scientists who want to optimise their literature searches1
  • Senior Managers1
  • Senior Researchers, Lab Managers, Postdocs and PhD Students with basic knowledge of DMPs. Participants in the "Introduction to Data Management Plans" workshop.1
  • Senior scientist/ Principal investigator1
  • Software providers1
  • System administrators1
  • Technicians1
  • Those interesting in exploring the data contained in their microscopy images, or those planning microscopy as part of their research programme1
  • beginner1
  • beginner bioinformaticians1
  • esearchers and research software engineers who would like to begin automating their analyses in workflows. 1
  • experimental nanoscientists1
  • geneticists1
  • journalists1
  • mass spectrometry1
  • mololecular cell biologists1
  • Show N_FILTERS more
• • Author
  • Helena Rasche83
  • Bérénice Batut75
  • Saskia Hiltemann46
  • SIB Swiss Institute of Bioinformatics34
  • Björn Grüning31
  • Anton Nekrutenko22
  • Nicola Soranzo20
  • Yvan Le Bras19
  • Katarzyna Kamieniecka18
  • Nate Coraor18
  • Simon Gladman18
  • Wendi Bacon18
  • Krzysztof Poterlowicz17
  • Fotis E. Psomopoulos16
  • Anthony Bretaudeau15
  • Anne Fouilloux14
  • Bazante Sanders14
  • Mehmet Tekman14
  • Julia Jakiela13
  • Maria Doyle13
  • Marie Josse13
  • The Carpentries13
  • Dave Clements10
  • Donny Vrins10
  • Mijke Jetten10
  • Subina Mehta10
  • Anup Kumar9
  • Khaled Jum'ah9
  • Pavankumar Videm9
  • Anika Erxleben8
  • Celia van Gelder8
  • Cristóbal Gallardo8
  • Helen Brown8
  • Lucille Delisle8
  • Paul Zierep8
  • Daniel Blankenberg7
  • Delphine Lariviere7
  • Joachim Wolff7
  • John Chilton7
  • Kaivan Kamali7
  • Korbinian Bösl7
  • Laura Cooper7
  • Marius van den Beek7
  • Martin Čech7
  • Robert Andrews7
  • Sergio Martínez Cuesta7
  • Allegra Via6
  • Andrew Mason6
  • Anne Pajon6
  • Branka Franicevic6
  • Coline Royaux6
  • ELIXIR Goblet Train the Trainers6
  • Egon Willighagen6
  • Eija Korpelainen6
  • Melanie Föll6
  • Michael Charleston6
  • Patricia Palagi6
  • Philippe Rocca-Serra6
  • Sara Morsy6
  • Wolfgang Maier6
  • Xenia Perez Sitja6
  • Alex Ostrovsky5
  • Alexandre Cormier5
  • Anna Syme5
  • Beatriz Serrano-Solano5
  • Clemens Blank5
  • Dechen Bhuming5
  • Erwan Corre5
  • Katherine Do5
  • Kellie Snow5
  • Korneel Hens5
  • Laura Leroi5
  • Maria Lehtivaara5
  • Mira Kuntz5
  • Morgan Howells5
  • Munazah Andrabi5
  • Nick Juty5
  • Personalized Health Informatics Group5
  • Pratik Jagtap5
  • Saskia Lawson-Tovey5
  • Alireza Khanteymoori4
  • Emma Griffiths4
  • Engy Nasr4
  • Florian Heyl4
  • Frédéric de Lamotte4
  • Geert van Geest4
  • Gildas Le Corguillé4
  • Hans-Rudolf Hotz4
  • Mallory Freeberg4
  • Simon Andrews4
  • Simon Bray4
  • Simone Leo4
  • Stéphanie Robin4
  • Vivek Bhardwaj4
  • Wandrille Duchemin4
  • Anne Segonds-Pichon3
  • Alexander Botzki3
  • Avans Hogeschool3
  • Belinda Phipson3
  • Caterina Fuster-Barceló3
  • Show N_FILTERS more
• • Contributor
  • Helena Rasche43
  • Saskia Hiltemann13
  • Wendi Bacon8
  • Pavankumar Videm7
  • Pratik Jagtap5
  • Sabine Österle5
  • Timothy J. Griffin5
  • Bazante Sanders4
  • Eija Korpelainen4
  • Lucille Delisle4
  • Mehmet Tekman4
  • Björn Grüning3
  • Bérénice Batut3
  • Clea Siguret3
  • Daniel Sobral3
  • David Philip Judge3
  • Fotis E. Psomopoulos3
  • Gautier Sarah3
  • Jean-François Dufayard3
  • Julia Jakiela3
  • Marisa Loach3
  • Miaomiao Zhou3
  • Nate Coraor3
  • Pedro Fernandes3
  • Pinar Alper3
  • Roland Krause3
  • Wolfgang Maier3
  • Yvan Le Bras3
  • Ahmed Hamid Awan2
  • Anthony Bretaudeau2
  • Edwin den Haas2
  • Hans-Rudolf Hotz2
  • Hélène Chiapello2
  • Julien Seiler2
  • Katarzyna Kamieniecka2
  • Krzysztof Poterlowicz2
  • Marie Josse2
  • Martin Čech2
  • Matthias Bernt2
  • Nene Barry2
  • Our list of contributors can be found on our course page.2
  • Paulette Lieby2
  • Stian Soiland-Reyes2
  • Thomas Denecker2
  • Toby Hodges2
  • Vilem Ded2
  • Federico Bianchini1
  • Anatole Chessel1
  • Ankerl Yassine1
  • Anne-Françoise Adam-Blondon1
  • Ava Hoffman1
  • Bethan Manley1
  • Bilal Shaikh1
  • Blaise Li1
  • Bruna Piereck Moura1
  • Candace Savonen1
  • Catherine Bromhead1
  • Chris Evelo1
  • Christophe Antoniewski1
  • Clair Castle1
  • Clare Sloggett1
  • Cristóbal Gallardo1
  • Cyril Pommier1
  • Célia Michotey1
  • Dave B.1
  • Donny Vrins1
  • Eivind Coward1
  • Ekaterina Polkh1
  • Eli Chadwick1
  • Elizabeth Humphries1
  • Emily Angiolini1
  • Enis Afgan1
  • Erwan Corre1
  • Espen Åberg1
  • Frederick Tan1
  • Gabriella Rustici1
  • Gary Saunders1
  • Geert Bonamie1
  • Gianmauro Cuccuru1
  • Gildas Le Corguillé1
  • Glinez Thibaud1
  • Gnaneswara Marupilla1
  • Graeme Tyson1
  • Ion Moraru1
  • James Taylor1
  • Jamie Edwards1
  • Janick Mathys1
  • John Chilton1
  • Jordi Rambla1
  • Josep Lluís Gelpí1
  • José Manuel Domínguez1
  • Juha Tornroos1
  • Katherine Cox1
  • Kenneth Hoste1
  • Kristin Gnodke1
  • Leandro Liborio1
  • Lionel Maurel1
  • Luigi Grassi1
  • Maria Lehtivaara1
  • Marius van den Beek1
  • Show N_FILTERS more
• • Resource type
  • e-learning366
  • slides89
  • Video30
  • Slidedeck29
  • Slides21
  • Training materials19
  • Tutorial16
  • course materials11
  • Presentation9
  • Webinar7
  • Documentation6
  • E-learning5
  • hands-on tutorial5
  • PDF4
  • Exercise3
  • Handout3
  • Scripts3
  • slideck/ presentation3
  • Computer Software2
  • FREE online course2
  • Installation instructions2
  • Jupyter notebook2
  • Manual2
  • Vignette2
  • Series of videos1
  • API reference1
  • Book1
  • Carpentries style curriculum1
  • Metadata Registry1
  • Mock data1
  • Recorded webinar1
  • Slideshow1
  • Training materials with mock data1
  • ViralZone1
  • educational materials1
  • hackathon1
  • workflow1
  • youtube video1
  • Show N_FILTERS more
• • Related resource
  • Associated Training Datasets268
  • Associated Workflows195
  • Quarto/RMarkdown Notebook186
  • Jupyter Notebook (with Solutions)27
  • Jupyter Notebook (without Solutions)27
  • ansible19
  • git-gat18
  • jobs5
  • interactive-tools4
  • Slides3
  • deploying3
  • monitoring3
  • ro-crate3
  • workflows3
  • DMPonline2
  • Workshop recording2
  • covid192
  • cyoa2
  • ncbi2
  • networking2
  • storage2
  • training2
  • wireguard2
  • CanCOGeN1
  • Chipster1
  • Community1
  • DDA1
  • DS Wizard ELIXIR-Norway 1
  • Data Stewardship Wizard1
  • ENA1
  • FAIR1
  • GEEM1
  • Galaxy project guided tours1
  • Next generation biobanking ontology (NGBO)1
  • Public Health Alliance for Genomic Epidemiology1
  • R1
  • RCN Open data policy 1
  • RDMkit 1
  • Ready For BioData Management?1
  • Recoding1
  • SIG1
  • Workshop FAIR & Data stewardship for the 2020 ITN ProEVLifeCycle1
  • Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle1
  • apollo21
  • authentication1
  • automation1
  • beacon1
  • broken1
  • cloud1
  • data1
  • fair1
  • features1
  • ga4gh1
  • gmod1
  • gtn1
  • recorded guidance on how to install a SciNote account1
  • recorded intro to hackathon1
  • recorded presentation on integration of ELNs in nanosciences1
  • systemd1
  • terraform1
  • tools1
  • work-in-progress1
  • Show N_FILTERS more
• • Node
  • Netherlands42
  • United Kingdom39
  • EMBL-EBI13
  • Switzerland11
  • France10
  • Finland9
  • Norway9
  • Portugal6
  • Slovenia6
  • Spain6
  • Luxembourg5
  • Belgium4
  • Czech Republic3
  • Denmark2
  • Germany1
  • Greece1
  • Show N_FILTERS more
• • Collection
  • Single-cell Omics Community - collection of courses and materials1
  • Show N_FILTERS more
• Show archived materials
• • Date added
  • In the last 24 hours
  • In the last 1 week
  • In the last 1 month