Training materials
Scientific topics: Genomics
and Difficulty level: Beginner
and Related resources: Associated Training Datasets
32 materials found
-
e-learning
Phylogenetic analysis for bacterial comparative genomics
• beginnerEvolutionary biology Genomics Microbiology Phylogeny Evolution microgalaxy work-in-progress -
e-learning
Bacterial pangenomics
• beginnerGenomics Microbiology Genome Annotation -
e-learning
Bacterial genome quality control
• beginnerGenomics Microbiology Genome Annotation microgalaxy work-in-progress -
e-learning
Dataset construction for bacterial comparative genomics
• beginnerGenomics Microbiology Genome Annotation microgalaxy work-in-progress -
e-learning
Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data
• beginnerMetagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome -
e-learning
Decontamination of a genome assembly
• beginnerSequence assembly Genomics Biodiversity Assembly biodiversity -
e-learning
Assembly of the mitochondrial genome from PacBio HiFi reads
• beginnerSequence assembly Genomics Biodiversity Mitochondria Assembly biodiversity -
e-learning
Quality and contamination control in bacterial isolate using Illumina MiSeq Data
• beginnerSequence analysis Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy -
e-learning
CRISPR screen analysis
• beginnerGenomics CRISPR Genome Annotation cell line essential genes genome editing -
e-learning
Essential genes detection with Transposon insertion sequencing
• beginnerGenomics Microbiology Sequence analysis Mobile genetic elements Genome Annotation bacteria essential genes microgalaxy tnseq