Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Computational ecology
    • Community analysis6
    • Environmental microbiology6
    • Microbial ecology6
    • Microbiome6
    • Molecular community analysis6
    • Biological sequences5
    • Sequence analysis5
    • Sequence databases5
    • Metagenomics4
    • Shotgun metagenomics4
    • Taxonomy4
    • Exomes3
    • Genome annotation3
    • Genomes3
    • Genomics3
    • Personal genomics3
    • Synthetic genomics3
    • Viral genomics3
    • Whole genomes3
    • Antimicrobial stewardship2
    • Assembly2
    • De novo genome sequencing2
    • Genome sequencing2
    • Medical microbiology2
    • Microbial genetics2
    • Microbial physiology2
    • Microbial surveillance2
    • Microbiological surveillance2
    • Microbiology2
    • Molecular infection biology2
    • Molecular microbiology2
    • Sequence assembly2
    • WGS2
    • Whole genome resequencing2
    • Whole genome sequencing2
    • Biodiversity1
    • DNA metabarcoding1
    • Disease1
    • Ecoinformatics1
    • Ecological informatics1
    • Ecology1
    • Ecosystem science1
    • Environmental metabarcoding1
    • Epidemiology1
    • Metabarcoding1
    • Pathology1
    • Public health1
    • Public health and epidemiology1
    • RNA metabarcoding1
    • eDNA metabarcoding1
    • eRNA metabarcoding1
    • Show N_FILTERS more
    • Tool
    • kraken2
    • Galaxy27
    • BLAST3
    • Stacks3
    • FASTX-Toolkit2
    • BWA1
    • Biopython1
    • Bracken1
    • Clustal 1.8 (Clustal W, Clustal X)1
    • Cutadapt1
    • Falco1
    • FastQC1
    • GEMINI1
    • InterProScan (EBI)1
    • MultiQC1
    • OBITools1
    • Prodigal1
    • Proteinortho1
    • Recentrifuge1
    • RepeatMasker1
    • fastp1
    • funannotate1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training1
    • Show N_FILTERS more
    • Keyword
    • Ecology1
    • bacteria1
    • illumina1
    • microgalaxy1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International1
    • Show N_FILTERS more
    • Target audience
    • Students1
    • Show N_FILTERS more
    • Author
    • Bérénice Batut1
    • Show N_FILTERS more
    • Contributor
    • Clea Siguret1
    • Helena Rasche1
    • Saskia Hiltemann1
    • Show N_FILTERS more
    • Resource type
    • e-learning1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets1
    • Associated Workflows1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Computational ecology

and Tools: kraken2

and Difficulty level: Beginner

1 material found
  • e-learning

    Checking expected species and contamination in bacterial isolate

    • beginner
    Ecology Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.