Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Genomics
    • Epigenomics6
    • Comparative transcriptomics3
    • Transcriptome3
    • Transcriptomics3
    • Assembly2
    • Exomes2
    • Genome annotation2
    • Genomes2
    • Personal genomics2
    • Sequence assembly2
    • Synthetic genomics2
    • Viral genomics2
    • Whole genomes2
    • Antimicrobial stewardship1
    • Biological sequences1
    • ChIP-exo1
    • ChIP-seq1
    • ChIP-sequencing1
    • Chip Seq1
    • Chip sequencing1
    • Chip-sequencing1
    • Community analysis1
    • Disease1
    • Environmental microbiology1
    • Epidemiology1
    • Low complexity sequences1
    • Medical microbiology1
    • Metagenomics1
    • Microbial ecology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Microbiome1
    • Molecular community analysis1
    • Molecular infection biology1
    • Molecular microbiology1
    • Nucleic acid repeats1
    • Pathology1
    • Protein repeats1
    • Protein sequence repeats1
    • Public health1
    • Public health and epidemiology1
    • Repeat sequences1
    • Sequence analysis1
    • Sequence complexity1
    • Sequence composition1
    • Sequence composition, complexity and repeats1
    • Sequence databases1
    • Sequence repeats1
    • Shotgun metagenomics1
    • Taxonomy1
    • Show N_FILTERS more
    • Tool
    • BEDTools
    • Galaxy31
    • FastQC6
    • Bandage4
    • JBrowse4
    • fastp4
    • Diamond3
    • Minimap23
    • MultiQC3
    • QUAST3
    • kraken23
    • BLAST2
    • BUSCO2
    • Bakta2
    • Bracken2
    • Bwa-mem22
    • Clustal 1.8 (Clustal W, Clustal X)2
    • Cutadapt2
    • Falco2
    • Flye2
    • GECKO2
    • GenomeScope 2.02
    • MAGeCK2
    • NanoPlot2
    • Recentrifuge2
    • gfastats2
    • tbl2gff32
    • Apollo1
    • BWA1
    • BamTools1
    • Bowtie1
    • Bowtie 21
    • CheckM1
    • Circos1
    • DeepTools1
    • FastTree1
    • Filtlong1
    • FreeBayes1
    • Galactic Circos1
    • ISEScan1
    • Integron Finder1
    • InterProScan (EBI)1
    • MAFFT1
    • Medaka1
    • Merqury1
    • NCBI Datasets1
    • NCBI Resources1
    • PPanGGOLiN1
    • PlasmidFinder1
    • Polypolish1
    • RAxML1
    • RED1
    • Racon1
    • RapidNJ1
    • RepeatMasker1
    • RepeatModeler1
    • SAMtools1
    • Smudgeplots1
    • TRANSIT1
    • Unicycler1
    • Vcflib1
    • antiSMASH1
    • bx-python1
    • chemfp1
    • compute_sequence_length1
    • dRep1
    • eggNOG-mapper v21
    • ggplot21
    • orfipy1
    • shovill1
    • snippy1
    • staramr1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training2
    • Show N_FILTERS more
    • Keyword
    • Assembly1
    • Genome Annotation1
    • biodiversity1
    • eukaryote1
    • gmod1
    • jbrowse11
    • microgalaxy1
    • prokaryote1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International2
    • Show N_FILTERS more
    • Target audience
    • Students2
    • Show N_FILTERS more
    • Author
    • Alexandre Cormier1
    • Anthony Bretaudeau1
    • Anton Nekrutenko1
    • Delphine Lariviere1
    • Erwan Corre1
    • Helena Rasche1
    • Jonathan Kreplak1
    • Laura Leroi1
    • Stéphanie Robin1
    • Show N_FILTERS more
    • Contributor
    • Anthony Bretaudeau2
    • Björn Grüning2
    • Bérénice Batut2
    • Helena Rasche2
    • Saskia Hiltemann2
    • Anton Nekrutenko1
    • Cristóbal Gallardo1
    • Jonathan Kreplak1
    • Laura Leroi1
    • Maria Doyle1
    • Niall Beard1
    • Nicola Soranzo1
    • Simon Bray1
    • Stéphanie Robin1
    • Show N_FILTERS more
    • Resource type
    • e-learning2
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets2
    • Associated Workflows2
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Genomics

and Tools: BEDTools

and Difficulty level: Beginner

2 materials found
  • e-learning

    Masking repeats with RepeatMasker

    • beginner
    Genomics Sequence composition, complexity and repeats Genome Annotation biodiversity eukaryote
  • e-learning

    Making sense of a newly assembled genome

    • beginner
    Sequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.