Training materials
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RNA-seq Analysis 2014 Module 3 - Expression and Differential Expression
Differential expression Transript expression
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RNA-seq Analysis 2014 Module 2 - Alignment and Visualization
Data visualization Rna seq alignment
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RNA-seq Analysis 2014 Module 1 - Introduction to RNA-seq Analysis
Experimental design rna seq Igv Introduction rna seq analysis
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Pathway and Network Analysis 2014 Module 6 - Gene Function Prediction
Functional association networks Gene function prediction Genemania
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Pathway and Network Analysis 2014 Module 5 - Network Visualization
Cytoscape Network visualization
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Pathway and Network Analysis 2014 Module 4 - Pathway and Network Analysis
Biological networks Kegg Pathway analysis Reactome
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Pathway and Network Analysis 2014 Module 3 - Gene Regulation Analysis
Pattern discovery Transcriptional regulation
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Pathway and Network Analysis 2014 Module 2 - Finding Over-represented Pathways
Gsea Over representation analysis
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Pathway and Network Analysis 2014 Module 1 - Introduction to Gene Lists
Gene lists Gene ontology
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Working with Affymetrix CEL files in R
Affymetrix Microarrays R