TeSS Sandbox (Training eSupport System)

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- Data management101
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- Algorithms88
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- Bottom-up proteomics50
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- Biological sequences39
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- Operation
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- ggplot28
- kraken28
- RStudio7
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- HISAT26
- MaxQuant6
- Open Babel6
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- seqtk6
- BamTools5
- Biopython5
- Bowtie 25
- Flye5
- Galactic Circos5
- MSstats5
- MetaPhlAn5
- Minimap25
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
- RSeQC5
- annotatemyids5
- xcms5
- Chipster4
- Diamond4
- HUMAnN24
- KrakenTools4
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- mothur4
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- Clustal 1.8 (Clustal W, Clustal X)3
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- GOseq3
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- GenomeScope 2.03
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- QualiMap3
- RDKit3
- SeqCode3
- SortMeRNA3
- Stacks3
- StringTie3
- Unicycler3
- Unipept3
- bx-python3
- compute_sequence_length3
- export2graphlan3
- gfastats3
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- Standard database or policy
- Ensembl10
- Protein Data Bank in Europe5
- European Nucleotide Archive4
- NCBI Gene4
- ChEMBL: a large-scale bioactivity database for drug discovery3
- IntAct molecular interaction database3
- Integrated resource of protein families, domains and functional sites3
- ArrayExpress2
- EBI Metagenomics2
- Minimum Information about Plant Phenotyping Experiment2
- OBO Foundry2
- STRING: functional protein association networks2
- Search Tool for Interactions of Chemicals2
- eNanoMapper Ontology2
- Wheat Data Interoperability Guidelines 1
- A repository of mathematical models of biological and biomedical systems1
- BRENDA1
- Bioschemas1
- BridgeDb1
- Cellular Microscopy Phenotype Ontology1
- Chemical Entities of Biological Interest1
- Common Workflow Language1
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- Europe PubMed Central1
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- Gene Ontology1
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- Genomics England | PanelApp1
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- IUPAC International Chemical Identifier1
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- MDL molfile Format1
- MetaboLights1
- Multi-Crop Passport Descriptors1
- OMOP Common Data Model1
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- Protein Data Bank: Proteins, Interfaces, Structures and Assemblies1
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- Simplified Molecular Input Line Entry Specification Format1
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- Content provider
- Galaxy Training641
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- Keyword
- Galaxy Server administration57
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- Foundations of Data Science50
- jupyter-notebook46
- data management41
- Single Cell38
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- Transcriptomics28
- FAIR27
- Rare Diseases & Research27
- Bioinformatics25
- Microbiome25
- Using Galaxy and Managing your Data25
- Contributing to the Galaxy Training Material24
- Development in Galaxy24
- Ecology24
- Genome Annotation23
- Statistics and machine learning21
- Assembly20
- Data analysis20
- FAIR data20
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- interactive-tools18
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Training materials

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Training materials

An Introduction to Unix

An Introduction to ggplot

Plotting complex figures with R

Advanced R

Introduction to R

Learning to Program with Perl

Analysing Mapped Sequence Data with SeqMonk

Researcher Training Day for Life Scientists_ Rad-seq with Stacks in Galaxy

EMBL-ABR workshop on Open Source and Software Development Best Practice

EMBL-ABR/ELIXIR/CyVerse workshop: Registries in Bioinformatics