Training materials
-
e-learning
Exploring microbial ecosystems: A curated collection of EMBL-EBI on-demand training
Microbial ecology Microbiology Metagenomics Biodiversity Statistics and probability Open access microbiome microbial ecosystems
-
e-learning
Working with Beacon V2: A Comprehensive Guide to Creating, Uploading, and Searching for Variants with Beacons
••• advancedGenetic variation Variant Analysis -
e-learning
Querying the University of Bradford GDC Beacon Database for Copy Number Variants (CNVs)
• beginnerGenetic variation Variant Analysis -
e-learning
Calculating α and β diversity from microbiome taxonomic data
• beginnerMetagenomics Microbial ecology Microbiome diversity metagenomics -
slides
Single-cell Formats and Resources
• beginnerSingle Cell -
e-learning
Quality and contamination control in bacterial isolate using Illumina MiSeq Data
• beginnerSequence analysis Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy -
e-learning
Single-cell ATAC-seq standard processing with SnapATAC2
•• intermediate10x Single Cell epigenetics single-cell -
Make your research FAIRer with Quarto, GitHub and Zenodo
• beginnerFAIR data management reproducible research -
slides
Galaxy Administrator Time Burden and Technology Usage
• beginnerGalaxy Server administration deploying maintenance survey -
e-learning
What's a Special Interest Group?
• beginnerGalaxy Community Building