Training materials
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Scientific topic
- Sequence databases
- Exomes3
- Genome annotation3
- Genomes3
- Genomics3
- Personal genomics3
- Synthetic genomics3
- Viral genomics3
- Whole genomes3
- Biological sequences2
- Sequence analysis2
- Assembly1
- Biodiversity1
- Comparative genomics1
- Function analysis1
- Functional analysis1
- Gene and protein families1
- Gene families1
- Gene family1
- Gene system1
- Genes, gene family or system1
- Phylogenetic clocks1
- Phylogenetic dating1
- Phylogenetic simulation1
- Phylogenetic stratigraphy1
- Phylogeny1
- Phylogeny reconstruction1
- Protein families1
- Protein function analysis1
- Protein function prediction1
- Protein sequence classification1
- Protein sequence features1
- Protein sites, features and motifs1
- Sequence assembly1
- Signal peptide cleavage sites1
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Tool
- Diamond
- Galaxy32
- FastQC8
- taxonomy_krona_chart8
- JBrowse6
- kraken25
- BamTools4
- Cutadapt4
- MetaPhlAn4
- NanoPlot4
- SAMtools4
- fastp4
- mothur4
- BLAST3
- BWA3
- HUMAnN23
- KrakenTools3
- MAFFT3
- MultiQC3
- Newick Utilities3
- Bakta2
- Bracken2
- FASTQE2
- GraPhlAn2
- Minimap22
- SortMeRNA2
- export2graphlan2
- ggplot22
- humann2
- pycoQC2
- seqtk2
- staramr2
- tbl2gff32
- ABRicate1
- Apollo1
- BCFtools1
- BEDTools1
- Bandage1
- BioRuby1
- Bowtie1
- Bowtie 21
- Clair31
- Clustal 2 (Clustal W, Clustal X)1
- DeepTools1
- FASTX-Toolkit1
- Falco1
- FastTree1
- Flye1
- FreeBayes1
- ISEScan1
- Integron Finder1
- Krona1
- MLST1
- Medaka1
- NCBI fcs1
- PlasmidFinder1
- QIIME1
- Racon1
- RapidNJ1
- Recentrifuge1
- TRANSIT1
- Trimmomatic1
- Unicycler1
- Vcflib1
- bx-python1
- compute_sequence_length1
- cshl_fastx_reverse_complement1
- dada21
- ete1
- iqtree1
- miniasm1
- orfipy1
- phyloseq1
- snippy1
- trimAl1
- varVAMP1
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Content provider
- Galaxy Training2
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Difficulty level
- Beginner2
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Target audience
- Students2
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- e-learning2
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Related resource
- Associated Training Datasets2
- Associated Workflows1
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