Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Molecular infection biology
    • Algorithms66
    • Computer programming66
    • Data structures66
    • Programming languages66
    • Software development66
    • Software engineering66
    • Exomes46
    • Genome annotation46
    • Genomes46
    • Genomics46
    • Personal genomics46
    • Synthetic genomics46
    • Viral genomics46
    • Whole genomes46
    • Bottom-up proteomics44
    • Discovery proteomics44
    • MS-based targeted proteomics44
    • MS-based untargeted proteomics44
    • Metaproteomics44
    • Peptide identification44
    • Protein and peptide identification44
    • Proteomics44
    • Quantitative proteomics44
    • Targeted proteomics44
    • Top-down proteomics44
    • Bayesian methods33
    • Biological sequences33
    • Biostatistics33
    • Descriptive statistics33
    • Gaussian processes33
    • Inferential statistics33
    • Markov processes33
    • Multivariate statistics33
    • Probabilistic graphical model33
    • Probability33
    • Sequence analysis33
    • Sequence databases33
    • Statistics33
    • Statistics and probability33
    • Computational ecology27
    • Ecoinformatics27
    • Ecological informatics27
    • Ecology27
    • Ecosystem science27
    • Rare diseases27
    • Antimicrobial stewardship25
    • Comparative transcriptomics25
    • Medical microbiology25
    • Microbial genetics25
    • Microbial physiology25
    • Microbial surveillance25
    • Microbiological surveillance25
    • Microbiology25
    • Molecular microbiology25
    • Transcriptome25
    • Transcriptomics25
    • Assembly23
    • Community analysis23
    • Environmental microbiology23
    • Metagenomics23
    • Microbial ecology23
    • Microbiome23
    • Molecular community analysis23
    • Sequence assembly23
    • Shotgun metagenomics23
    • DNA variation22
    • Genetic variation22
    • Genomic variation22
    • Mutation22
    • Polymorphism22
    • Somatic mutations22
    • Taxonomy15
    • Biodiversity14
    • Data management14
    • Metadata management14
    • Research data management (RDM)14
    • Diffraction experiment13
    • Exometabolomics13
    • Imaging13
    • LC-MS-based metabolomics13
    • MS-based metabolomics13
    • MS-based targeted metabolomics13
    • MS-based untargeted metabolomics13
    • Mass spectrometry-based metabolomics13
    • Metabolites13
    • Metabolome13
    • Metabolomics13
    • Metabonomics13
    • Microscopy13
    • Microscopy imaging13
    • NMR-based metabolomics13
    • Optical super resolution microscopy13
    • Photonic force microscopy13
    • Photonic microscopy13
    • Bioinformatics10
    • Protein bioinformatics10
    • Protein databases10
    • Protein informatics10
    • Protein structure10
    • Show N_FILTERS more
    • Tool
    • Galaxy22
    • JBrowse5
    • FastQC4
    • fastp4
    • kraken23
    • snippy3
    • BCFtools2
    • Bakta2
    • Bandage2
    • Bracken2
    • COMBAT-TB Workbench2
    • Falco2
    • NanoPlot2
    • QUAST2
    • Recentrifuge2
    • SAMtools2
    • Unicycler2
    • staramr2
    • tb-profiler2
    • tbl2gff32
    • Apollo1
    • BEDTools1
    • BWA1
    • BamTools1
    • Bowtie1
    • Bowtie 21
    • Bwa-mem21
    • CheckM1
    • Circos1
    • DeepTools1
    • FastTree1
    • Filtlong1
    • Flye1
    • FreeBayes1
    • Galactic Circos1
    • ISEScan1
    • Integron Finder1
    • Jvarkit1
    • Minimap21
    • MultiQC1
    • NCBI Datasets1
    • PPanGGOLiN1
    • PlasmidFinder1
    • Polypolish1
    • QualiMap1
    • RAxML1
    • Racon1
    • TRANSIT1
    • Trimmomatic1
    • Vcflib1
    • compute_sequence_length1
    • dRep1
    • ggplot21
    • miniasm1
    • shovill1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training22
    • European Bioinformatics Institute (EBI)3
    • Show N_FILTERS more
    • Keyword
    • microgalaxy20
    • prokaryote9
    • Genome Annotation8
    • gmod6
    • jbrowse16
    • illumina5
    • Assembly4
    • bacteria4
    • one-health4
    • Evolution3
    • Variant Analysis3
    • amr3
    • assembly3
    • work-in-progress3
    • Microbiome2
    • biodiversity2
    • nanopore2
    • AMR1
    • Bacteria1
    • Ecology1
    • Metabolites1
    • Metabolome1
    • Open access1
    • Pathogens1
    • Pathogens Portal1
    • Sequence analysis1
    • Small molecules1
    • apollo21
    • essential genes1
    • microbial ecosystems1
    • microbiome1
    • phylogenetics1
    • plasmids1
    • tnseq1
    • tuberculosis1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner19
    • Intermediate3
    • Not specified3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International22
    • License Not Specified3
    • Show N_FILTERS more
    • Target audience
    • Students22
    • Clinicians3
    • PhD students3
    • Show N_FILTERS more
    • Author
    • Bérénice Batut12
    • Hélène Chiapello4
    • Simon Gladman4
    • Valentin Loux4
    • Anton Nekrutenko3
    • Bazante Sanders3
    • Delphine Lariviere3
    • Anna Syme2
    • Christoph Stritt2
    • Daniela Brites2
    • Galo A. Goig2
    • Helena Rasche2
    • Torsten Seemann2
    • Alex Ostrovsky1
    • Anthony Bretaudeau1
    • Clea Siguret1
    • Didier Debroas1
    • Guillaume Gautreau1
    • Mateo Boudet1
    • Nadia Goué1
    • Nathan Dunn1
    • Peter van Heusden1
    • Saskia Hiltemann1
    • Thoba Lose1
    • Willem de Koning1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning17
    • Bérénice Batut16
    • Helena Rasche16
    • Saskia Hiltemann16
    • Anthony Bretaudeau14
    • Niall Beard5
    • Nicola Soranzo5
    • Wolfgang Maier5
    • Peter van Heusden4
    • Anton Nekrutenko3
    • Bazante Sanders3
    • Cristóbal Gallardo3
    • Maria Doyle3
    • Miaomiao Zhou3
    • Teresa Müller3
    • Christoph Stritt2
    • Clea Siguret2
    • Deepti Varshney2
    • Delphine Lariviere2
    • Gildas Le Corguillé2
    • Mélanie Petera2
    • Nate Coraor2
    • Simon Gladman2
    • Verena Moosmann2
    • William Durand2
    • pimarin2
    • Alex Ostrovsky1
    • Anna Syme1
    • Enis Afgan1
    • Galo A. Goig1
    • Jennifer Hillman-Jackson1
    • Linelle Abueg1
    • Lucille Delisle1
    • Matúš Kalaš1
    • Paul Zierep1
    • Simon Bray1
    • Stéphanie Robin1
    • Vijay1
    • Willem de Koning1
    • mmiladi1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • Recorded webinar10
    • Tutorial1
    • Video1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets22
    • Associated Workflows18
    • Show N_FILTERS more
    • Node
    • EMBL-EBI3
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Molecular infection biology

and Resource type: e-learning

25 e-learning materials found
  • e-learning

    Calling variants in non-diploid systems

    • beginner
    Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote
  • e-learning

    M. tuberculosis Variant Analysis

    •• intermediate
    Genetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …
  • e-learning

    Unicycler Assembly

    • beginner
    Sequence assembly Genomics Microbiology Assembly biodiversity microgalaxy prokaryote
  • e-learning

    Genome annotation with Prokka

    • beginner
    Genomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote
  • e-learning

    MGnify: Quick tour

    ELIXIR node event
    Metagenomics Metatranscriptomics Microbiology Small molecules Metabolites Metabolome
  • 1
  • 2
  • 3
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.