Training materials
-
e-learning
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy … -
e-learning
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
e-learning
Clean and manage Sanger sequences from raw files to aligned consensus
• beginnerSequence analysis -
e-learning
NCBI BLAST+ against the MAdLand
• beginnerSequence analysis plants -
e-learning
Screening assembled genomes for contamination using NCBI FCS
• beginnerSequence analysis -
e-learning
Quality Control
• beginnerSequence analysis -
e-learning
Mapping
• beginnerSequence analysis Mapping -
slides
Quality Control
• beginnerSequence analysis -
slides
Mapping
• beginnerSequence analysis