Training materials
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e-learning
Phylogenetic analysis for bacterial comparative genomics
• beginnerEvolutionary biology Genomics Microbiology Phylogeny Evolution microgalaxy work-in-progress -
e-learning
Bacterial pangenomics
• beginnerGenomics Microbiology Genome Annotation -
e-learning
Bacterial genome quality control
• beginnerGenomics Microbiology Genome Annotation microgalaxy work-in-progress -
e-learning
Dataset construction for bacterial comparative genomics
• beginnerGenomics Microbiology Genome Annotation microgalaxy work-in-progress -
e-learning
Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data
• beginnerMetagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome -
Recorded webinar
MGnify Proteins: a new resource of 2.5 billion proteins for exploring metagenomics sequence space
Metagenomics Microbial ecology Microbiology Metatranscriptomics Sequence assembly
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e-learning
Investigating antimicrobial resistance with EMBL-EBI resources: A practical introduction
Antimicrobial resistance Microbiology Infectious disease Pathogens Portal Bacteria Pathogens AMR
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e-learning
Exploring microbial ecosystems: A curated collection of EMBL-EBI on-demand training
Microbial ecology Microbiology Metagenomics Biodiversity Statistics and probability Open access microbiome microbial ecosystems
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e-learning
Quality and contamination control in bacterial isolate using Illumina MiSeq Data
• beginnerSequence analysis Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy -
e-learning
Essential genes detection with Transposon insertion sequencing
• beginnerGenomics Microbiology Sequence analysis Mobile genetic elements Genome Annotation bacteria essential genes microgalaxy tnseq