Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Comparative transcriptomics3
    • Transcriptome3
    • Transcriptomics3
    • Show N_FILTERS more
    • Tool
    • DESeq2
    • Galaxy330
    • FastQC33
    • SAMtools27
    • MultiQC24
    • Bioconductor23
    • BWA20
    • fastp18
    • BEDTools16
    • scikit-learn15
    • Cutadapt14
    • JBrowse14
    • SCANPY14
    • BLAST12
    • DeepTools12
    • STAR11
    • BUSCO10
    • Falco10
    • QUAST10
    • ggplot210
    • taxonomy_krona_chart10
    • FreeBayes9
    • GEMINI9
    • Trimmomatic9
    • scikit-image9
    • FASTX-Toolkit8
    • Galaxy Image Analysis8
    • NanoPlot8
    • kraken28
    • BCFtools7
    • BamTools7
    • HISAT27
    • msConvert7
    • Bandage6
    • Biopython6
    • Bowtie 26
    • MAFFT6
    • MaxQuant6
    • Open Babel6
    • RStudio6
    • Workflow4Metabolomics6
    • gffread6
    • seqtk6
    • Flye5
    • Galactic Circos5
    • MetaPhlAn5
    • Minimap25
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • RSeQC5
    • StringTie5
    • Trim Galore5
    • annotatemyids5
    • compute_sequence_length5
    • gffcompare5
    • xcms5
    • Bwa-mem24
    • Diamond4
    • GOseq4
    • KrakenTools4
    • MACS4
    • MSstats4
    • Merqury4
    • Newick Utilities4
    • SRA Software Toolkit4
    • The Protein Data Bank (PDB)4
    • UniProt4
    • anndata4
    • bx-python4
    • mothur4
    • pyGenomeTracks4
    • snpEff4
    • Apollo3
    • Bracken3
    • Cardinal3
    • CellProfiler3
    • Clustal 1.8 (Clustal W, Clustal X)3
    • DropletUtils3
    • FastTree3
    • GenomeScope 2.03
    • GraPhlAn3
    • InterProScan (EBI)3
    • OMArk3
    • QualiMap3
    • RDKit3
    • Salmon3
    • SeqCode3
    • SortMeRNA3
    • Stacks3
    • UCSC Genome Browser Utilities3
    • Unicycler3
    • Unipept3
    • Vcflib3
    • bed to protein map3
    • customProDB3
    • export2graphlan3
    • gfastats3
    • humann3
    • iqtree3
    • lofreq3
    • snippy3
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training3
    • Show N_FILTERS more
    • Keyword
    • Transcriptomics3
    • bulk2
    • collections2
    • rna-seq2
    • PCA1
    • QC1
    • clustering1
    • cyoa1
    • drosophila1
    • miRNA1
    • mouse1
    • plants1
    • stress tolerance1
    • work-in-progress1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Pavankumar Videm2
    • Anika Erxleben1
    • Beatriz Serrano-Solano1
    • Bérénice Batut1
    • Casper de Visser1
    • Charlotte Adang1
    • Clemens Blank1
    • Cristóbal Gallardo1
    • Lucille Delisle1
    • Mallory Freeberg1
    • Maria Doyle1
    • Mo Heydarian1
    • Nicola Soranzo1
    • Peter van Heusden1
    • Peter-Bram 't Hoen1
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann3
    • Björn Grüning2
    • Bérénice Batut2
    • Cristóbal Gallardo2
    • Helena Rasche2
    • Pavankumar Videm2
    • Amirhossein Naghsh Nilchi1
    • Anika Erxleben1
    • Armin Dadras1
    • Beatriz Serrano-Solano1
    • Clea Siguret1
    • Clemens Blank1
    • Ekaterina Polkh1
    • Graeme Tyson1
    • Hans-Rudolf Hotz1
    • Lucille Delisle1
    • Maria Doyle1
    • Marius van den Beek1
    • Martin Čech1
    • Mehmet Tekman1
    • Nate Coraor1
    • Niall Beard1
    • Nicola Soranzo1
    • Peter-Bram 't Hoen1
    • Simon Bray1
    • William Durand1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows3
    • Associated Training Datasets2
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: DESeq2

and User: scraper

3 materials found
  • e-learning

    RNA-Seq data analysis, clustering and visualisation tutorial

    • beginner
    Transcriptomics PCA bulk clustering collections mouse rna-seq work-in-progress
  • e-learning

    Whole transcriptome analysis of Arabidopsis thaliana

    • beginner
    Transcriptomics miRNA plants stress tolerance
  • e-learning

    Reference-based RNA-Seq data analysis

    • beginner
    Transcriptomics QC bulk collections cyoa drosophila rna-seq
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.