TeSS Sandbox (Training eSupport System)

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hands-on tutorial, slides, test?

TeSS Test - Complete Material Example

•• intermediate
Sequence analysis Sequence generation material example keywords
Online tutorial

EVA

Nucleic acid sequence
Online tutorial

Bioinformatics for the terrified
Online tutorial

ENA
Online tutorial

Test quick tour
Course materials

Single-cell RNA-seq analysis using R
Course materials

Cancer genomics 2021
Course materials

Summer school in bioinformatics 2021
e-learning

Genome Properties: Quick tour

Functional annotation Protein signature models Phylogenetic profiling
PhenoMeNal: accessing metabolomics workflows in Galaxy

• beginner
Metabolomics Chemical biology Galaxy
Recorded webinar

The International Mouse Phenotyping Consortium (IMPC): a large-scale functional catalogue of mammalian genes

Animal study Genetics Genotype and phenotype
Recorded webinar

Using Europe PMC for effective literature research

• beginner
Literature search peer reviewed articles Europe PMC, Preprints Data links Annotations Europe PMC, ORCID
Recorded webinar

Exploring ChEMBL Data with the new ChEMBL Interface
Recorded webinar

test webinar
Course materials

Interpreting the effects of genetic variants on protein structure and function: EMBL-EBI resources in practice
Recorded webinar

A guide to sequence analysis resources in Job Dispatcher
Course materials

Small molecule chemistry: from proteins to pathways: EMBL-EBI resources in practice
e-learning

Pfam: Creating protein families

Protein structure analysis Protein sites, features and motifs Multiple sequence alignments Profile Hidden Markov models HMMs Protein families
Course materials

Proteomics bioinformatics 2024
e-learning

Metabolomics: An introduction

Metabolomics Small molecules Metabolites Metabolome
Recorded webinar

Getting gene and genome data programmatically: Ensembl REST API
e-learning

GOA and QuickGO: Quick tour

Gene ontology Gene ontology annotation Controlled vocabulary
e-learning

PDBeChem: Searching for small molecules and small molecule fragments

Structural biology Small molecules Ligands PDBe
Course materials

Introduction to multi-omics data integration and visualisation
Recorded webinar

Multi-omics comparative pathway analysis with ReactomeGSA

Omics
Recorded webinar

Using Europe PMC for effective literature research
Video

A common framework for designing portable federated pipelines

•• intermediate
Data architecture, analysis and design data access federated data analysis
Installation instructions, Manual

How to use Common Workflow Language

• beginner
Workflows commonwl common workflow language CWL eLearning EeLP
Recorded webinar

Retrieving biological data from EMBL-EBI resources using Dbfetch
Course materials

Genome bioinformatics: resequencing and variant calling

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Training coordinator

TeSS Test - Complete Material Example

EVA

Bioinformatics for the terrified

ENA

Test quick tour

Single-cell RNA-seq analysis using R

Cancer genomics 2021

Summer school in bioinformatics 2021

Genome Properties: Quick tour

PhenoMeNal: accessing metabolomics workflows in Galaxy

The International Mouse Phenotyping Consortium (IMPC): a large-scale functional catalogue of mammalian genes

Using Europe PMC for effective literature research

Exploring ChEMBL Data with the new ChEMBL Interface

test webinar

Interpreting the effects of genetic variants on protein structure and function: EMBL-EBI resources in practice

A guide to sequence analysis resources in Job Dispatcher

Small molecule chemistry: from proteins to pathways: EMBL-EBI resources in practice

Pfam: Creating protein families

Proteomics bioinformatics 2024

Metabolomics: An introduction

Getting gene and genome data programmatically: Ensembl REST API

GOA and QuickGO: Quick tour

PDBeChem: Searching for small molecules and small molecule fragments

Introduction to multi-omics data integration and visualisation

Multi-omics comparative pathway analysis with ReactomeGSA

Using Europe PMC for effective literature research

A common framework for designing portable federated pipelines

How to use Common Workflow Language

Retrieving biological data from EMBL-EBI resources using Dbfetch

Genome bioinformatics: resequencing and variant calling

FEBS: In Silico Systems Biology: Network Reconstruction, Analysis and Network-based Modelling

EBI - Joint EBI-Wellcome Trust Proteomics Bioinformatics workshop

Using the Ensembl Genome Browser

Managing a bioinformatics core facility

Genome bioinformatics: from short- to long-read sequencing

Structural bioinformatics

Metagenomics bioinformatics at MGnify

Methods for infectious disease modelling using genomics

Introduction to multi-omics data integration and visualisation

Introduction to RNA-seq and functional interpretation

Single-cell RNA-seq analysis with Python

Introduction to metabolomics analysis

Data-driven approaches to understanding dementia

Microscopy data analysis: machine learning and the BioImage Archive

Genome bioinformatics: from short- to long-read sequencing

Structural bioinformatics

Metagenomics bioinformatics at MGnify

Bioinformatics for immunologists

Proteomics bioinformatics

Data science for life scientists

Systems biology: from large datasets to biological insight

Causality in biomedicine: going beyond associations

Chemicals in a biological context: metabolites, drugs, and beyond

From sequences to structures: Protein characterisation using EMBL-EBI APIs

A guide to UniProt for students

Computational Biology Training in Hematology 2025, Module 2

European Bioinformatics Institute (EBI)

European Bioinformatics Institute (EBI)

CINECA PROJECT