Content Providers
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Novo Nordisk Foundation Center for Protein Research
Novo Nordisk Foundation Center for Protein Research was established in 2007 at the Faculty of Health and Medical Sciences, University of Copenhagen, to promote basic and applied discovery research on human proteins of medical relevance.
The...
3 training materialsNovo Nordisk Foundation Center for Protein Research http://www.cpr.ku.dk/ https://dev.tess.elixir-europe.org/content_providers/novo-nordisk-foundation-center-for-protein-research Novo Nordisk Foundation Center for Protein Research was established in 2007 at the [Faculty of Health and Medical Sciences](http://healthsciences.ku.dk/), [University of Copenhagen](http://www.ku.dk/), to promote basic and applied discovery research on human proteins of medical relevance. The establishment of the center was made possible by a generous donation of 600 million DKK (~113 MUSD) from the [Novo Nordisk Foundation](http://www.novonordiskfonden.dk/en) as well as through significant contributions from the University of Copenhagen for the renovation of the center facilities. In the beginning of 2015 the Novo Nordisk Foundation donated additional 180 million DKK for the next funding period. /system/content_providers/images/000/000/088/original/cpr.png?1520154812 -
COG-Train
COG-Train is an international educational initiative providing open-access learning in SARS-CoV-2 genomics. It aims to facilitate an increase in global genome sequencing and analysis capacity, reduce sequencing inequality and enhance pathogen surveillance.
The programme’s training courses and...
3 training materialsCOG-Train https://www.cogconsortium.uk/priority-areas/training/ https://dev.tess.elixir-europe.org/content_providers/cog-train COG-Train is an international educational initiative providing open-access learning in SARS-CoV-2 genomics. It aims to facilitate an increase in global genome sequencing and analysis capacity, reduce sequencing inequality and enhance pathogen surveillance. The programme’s training courses and development are built around our core concept of partnering with international researchers, public health experts and surveillance networks and providing open-access FREE training for all. COG-Train is funded by Wellcome Trust and the Foreign, Commonwealth & Development Office and led jointly by COVID-19 Genomics UK (COG-UK) consortium and Wellcome Connecting Science (WCS). Whole Viral Genome sequencing is an essential tool to identify and track the emergence and spread of SARS-CoV-2 variants as the COVID-19 pandemic progresses. Sequence data informs public health interventions and the further development of diagnostics, therapeutics and vaccines. There is inequity of access to pathogen sequencing worldwide, and COG-Train is committed to contributing towards efforts that close this gap. By building global partnerships with sequencing networks and scientists around the world, we hope to build a truly inclusive training programme that shares the many challenges faced in sequencing efforts, as well as highlighting the numerous success stories, and facilitating knowledge sharing. Outputs include a series of massive online, open-access courses on all aspects of SARS-CoV-2 sequencing based on WCS’s successful use of the FutureLearn platform, as well as week-long intensive virtual training courses, short expert workshops and concurrent distributed Classrooms, the latter of which utilises blended training. The distributed classroom model will be used to increase reach and impact of the learning materials, with training being delivered simultaneously in multiple classrooms across many countries. The training programme includes train-the-trainer components to help further build capacity in-country, rather than rely on a one-hit train and leave model. The COG-Train educational programme builds on the COG-UK values of data sharing, open collaboration, value for money, inclusivity and the prioritisation of public health impact. /system/content_providers/images/000/000/644/original/COG-Train_Logo.png?1673039811 -
University of Leicester Bioinformatics and Biostatistics Analysis Support Hub (BBASH)
The ongoing development of next generation sequencing (NGS) technologies has meant that vast amounts of sequencing data is being produced, with researchers increasingly wanting the capability and knowledge to analyse their own data. Over the past 3 years BBASH has developed a number of 1, 2 and...
0 events (2 past events)University of Leicester Bioinformatics and Biostatistics Analysis Support Hub (BBASH) https://www2.le.ac.uk/colleges/medbiopsych/facilities-and-services/cbs/bbash https://dev.tess.elixir-europe.org/content_providers/university-of-leicester-bioinformatics-and-biostatistics-analysis-support-hub-bbash The ongoing development of next generation sequencing (NGS) technologies has meant that vast amounts of sequencing data is being produced, with researchers increasingly wanting the capability and knowledge to analyse their own data. Over the past 3 years BBASH has developed a number of 1, 2 and 3 day hands-on, NGS analysis workshops designed specificially to meet the needs of laboratory based researchers with little or no experience of NGS data analysis and command line tools. The workshops are held at the University of Leicester's state of the art College Court Conference Centre and consist of introductory presentations followed by practical sessions where delegates will gain hands-on experience of analysing and interpreting real data. The BBASH trainers are University of Leicester bioinformaticians or researchers with many years experience in bioinformatics and bioinformatics training, having delivered many workshops across the UK and Europe. /system/content_providers/images/000/000/086/original/BBASHlogo.png?1509536575 -
FAIRDOM
Research Infrastructure supporting life scientists in managing their data and models FAIRly. Specifically designed for interdisciplinary research such as systems biology, systems medicine, and synthetic biology.
1 training material0 events (2 past events)FAIRDOM https://fair-dom.org/ https://dev.tess.elixir-europe.org/content_providers/fairdom Research Infrastructure supporting life scientists in managing their data and models FAIRly. Specifically designed for interdisciplinary research such as systems biology, systems medicine, and synthetic biology. /system/content_providers/images/000/000/100/original/Screen_Shot_2018-09-06_at_15.54.17.png?1536245244 -
ELIXIR Hungary
The Hungarian ELIXIR Node will include twelve different Hungarian universities and research institutes. The participating institutes represent five major scientific focus:
- Human genomics
- Proteomics
- Agricultural genomics
- Veterinary sciences and Ecology.
The Node has not established a...
0 events (2 past events)ELIXIR Hungary http://elixir-hungary.org/ https://dev.tess.elixir-europe.org/content_providers/elixir-hungary The Hungarian ELIXIR Node will include twelve different Hungarian universities and research institutes. The participating institutes represent five major scientific focus: * Human genomics * Proteomics * Agricultural genomics * Veterinary sciences and Ecology. The Node has not established a Service Delivery Plan yet, but it can be anticipated that: * Protein databases (e.g. IUPred, ANCHOR, UniTmp) * Biomarker assesment portals (e.g. G-2-O, Kaplan-Meier Plotter) * Data depositories (e.g. Hungarian Oncogenome Portal) and * Virtual research environments (e.g. Kooplex) will be part of it. Joining ELIXIR, Hungary has the opportunity to strengthen collaboration among its diverse and scattered bioinformatics community. With the coordination of the resources at national level, the aforementioned services and tools will be more visible to the international research community. This goes hand in hand with the development of up to date bioinformatics courses in the education and training field. /system/content_providers/images/000/000/107/original/elixir-hungary.png?1542963208 -
UCLouvain Bioinformatics Platform
The platform's goak is to collaborate throughput the scientific community at the UCLouvain and offer technical and methodological bioinformatics support, including, among others:
support the bioinformatics aspects of grant proposals and experimental designs
high throughput omics data analysis...1 training material0 events (2 past events)UCLouvain Bioinformatics Platform https://uclouvain.be/en/research/bioinfo https://dev.tess.elixir-europe.org/content_providers/uclouvain-bioinformatics-platform The platform's goak is to collaborate throughput the scientific community at the UCLouvain and offer technical and methodological bioinformatics support, including, among others: support the bioinformatics aspects of grant proposals and experimental designs high throughput omics data analysis such as genomics, epigenetics and transcriptomics (RNASeq or microarrays) or mass spectrometry based proteomics and metabolomics help in utilisation of public databases (TCGA, Gtex, CCLE, ENCODE, ...) development of dedicated algorithms and software. The platform also organises workshops in data analysis and bioinformatics to introduce particpants to widely used languages such as R, and get them started in the analysis of their own omics data. For additional information and any collaboration requests, please contact us by email at contact-cbio@uclouvain.be describing your needs, including, if data is already available, the underlying technology and experimental design. Members Prof Laurent Gatto Mr Theo Killian Dr Axelle Loriot Contact: contact-cbio@uclouvain.be CBIO - de Duve Institute - UCLouvain Avenue Hippocrate, 75 - bte B1.74.10 1200 Brussels, Belgium -
DeiC – Danish e-Infrastructure Cooperation
DeiC – Danish e-Infrastructure Cooperation has the stated aim of supporting the development of Denmark as an eScience nation through the delivery of e-infrastructure (computing, data warehousing, network connections and auxiliary services), guidance, and initiatives at national level. DeiC is a...
2 training materialsDeiC – Danish e-Infrastructure Cooperation https://vidensportal.deic.dk https://dev.tess.elixir-europe.org/content_providers/deic-danish-e-infrastructure-cooperation DeiC – Danish e-Infrastructure Cooperation has the stated aim of supporting the development of Denmark as an eScience nation through the delivery of e-infrastructure (computing, data warehousing, network connections and auxiliary services), guidance, and initiatives at national level. DeiC is a virtual unit under the Danish Ministry of Higher Education and Science and the result of an agreement concluded between the eight Danish universities and the Danish Agency for Science and Higher Education. For details, see www.deic.dk. /system/content_providers/images/000/000/117/original/deic-logo.jpg?1568809393 -
QCIF
QCIF (Queensland Cyber Infrastructure Foundation) provides high-performance services, infrastructure and expertise to enable excellence in data-centric, collaborative research.
QCIF operates with its members and partners delivering high-value services to researchers throughout Queensland and...
0 events (2 past events)QCIF https://www.qcif.edu.au https://dev.tess.elixir-europe.org/content_providers/qcif QCIF (Queensland Cyber Infrastructure Foundation) provides high-performance services, infrastructure and expertise to enable excellence in data-centric, collaborative research. QCIF operates with its members and partners delivering high-value services to researchers throughout Queensland and Australia. QCIF’s members are six Queensland universities: The University of Queensland, Queensland University of Technology, Griffith University, James Cook University, CQUniversity, and the University of Southern Queensland. The University of the Sunshine Coast is an associate member. /system/content_providers/images/000/000/122/original/QCIF_RGB_small.jpg?1579735144 -
Biomedical Sciences Research Center "Alexander Fleming"
The Biomedical Sciences Research Center "Alexander Fleming" is a non-profit research organisation based in Vari, Athens, Greece.
Since the beginning of its operations in 1998, the Center develops basic as well as translational and applied research programs at the cutting edge of modern...
1 training materialBiomedical Sciences Research Center "Alexander Fleming" https://www.fleming.gr/ https://dev.tess.elixir-europe.org/content_providers/biomedical-sciences-research-center-alexander-fleming The Biomedical Sciences Research Center "Alexander Fleming" is a non-profit research organisation based in Vari, Athens, Greece. Since the beginning of its operations in 1998, the Center develops basic as well as translational and applied research programs at the cutting edge of modern biomedical sciences. Currently, the Center hosts 14 research groups distributed in 4 Institutes (Immunology, Molecular Oncology, Molecular Biology and Genetics, Cellular & Developmental Biology). Over the short period since its establishment, BSRC "Alexander Fleming" has gained extensive visibility in the European science arena. Fleming researchers have established transgenic animal models for rheumatoid arthritis, inflammatory bowel disease and multiple sclerosis and these models have served as a basis for multiple collaborations with the international biopharmaceutical industry in the evaluation of novel therapeutic compounds, or as tools for collaborative R&D. The Center is equipped with state-of-the-art Core Units which include: an Expression Profiling Facility, a Flow Cytometry Facility, a Protein Chemistry Lab, a Transgenics and gene targeting Unit, and a BioIT Unit, all of which serve internal collaborations, as well as external partners in academia and industry. The Center also runs an Innovation and Enterprise Unit that facilitates the protection and exploitation of the Center’s research and technologies. Fleming operates its own Animal House, which can house up to 15,000 mice, and has its own complete mouse histopathology unit. Fleming’s Animal house (certified with ISO 9001) provides husbandry of animals and services to the biomedical research community since 2001. It covers an area of approximately 600 m2 within the Center and is equipped with highly automated systems that provide the best possible conditions for mouse reproduction and maintenance. Its main activity is the reproduction and maintenance of mice stocks either of inbred strains or genetically engineered mice, such as transgenic and knockout mouse lines, as well as chemically induced mutants developed by Fleming researchers. The Animal House has a capacity to house more than 18,000 mice and is currently the largest Mouse Unit in Greece in terms of number and variety of mice. The Facility became a full member of EMMA in 2009. Main areas of research: Functional genomics and proteomics; Molecular and cellular immunology; Animal models of human disease; Transcriptional and post-transcriptional mechanisms of gene regulation; DNA repair; Stem Cell differentiation; Epigenetics; Learning and memory; ECM biology. Fields of excellence: Molecular mechanisms of disease (inflammation, cancer, metabolic syndrome, CNS disorders). /system/content_providers/images/000/000/051/original/logo.png?1469458221 -
Genomics Core KU Leuven/UZ Leuven
The Genomics Core is a facility that advances the development and implementation of novel genomic technologies. The facility provides technological and intellectual support for scientific applications as well as next generation genetic diagnosis.
The genomics core partners within the...0 events (1 past event)Genomics Core KU Leuven/UZ Leuven https://gc.uzleuven.be https://dev.tess.elixir-europe.org/content_providers/genomics-core-ku-leuven-uz-leuven The Genomics Core is a facility that advances the development and implementation of novel genomic technologies. The facility provides technological and intellectual support for scientific applications as well as next generation genetic diagnosis. The genomics core partners within the Universitaire ziekenhuizen KULeuven to enable the BELAC-accredited breast cancer (BRCA) genetic test as well as non-invasive prenatal testing (NIPT).