Workshops and courses

ELIXIR node event An introduction to EMBL-EBI resources

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Date: 21 September 2022

EMBL-EBI is the home of the world's most comprehensive range of freely available molecular databases and resources. Our resources help researchers share and analyse data and perform complex queries in many different ways. Join us for a tour of the core data resources at EMBL-EBI.

During this webinar, we will introduce the types of data available, how you can search for data and the various ways of getting assistance. We will also discuss the role of EMBL-EBI in making data open and accessible, and how you can include EMBL-EBI data in your workflows. 

We will also provide information on further online training to help you learn more about specific topics in bioinformatics and EMBL-EBI resources, including an introduction to the training collections. The collections bring together training on a specific area and include those on Introductory bioinformatics and Chemical biology. After completing one of these collections, you may then join us at a related Question & Answer webinar where you will have the opportunity to ask questions to EMBL-EBI experts; search our live webinars for any upcoming Q&A webinars.

Overview of webinar recording (start with the introduction to watch the whole recording or click a section to go directly to that part of the recording):

  1. Introduction
  2. Data resources at EMBL-EBI
  3. Navigating EMBL-EBI data resources
  4. Data submission
  5. EMBL-EBI Training

Keywords: Fermentation, Microbial ecosystems webinar, UniProt: The Universal Protein Resource, Proteins (proteins), BLAST, Open Targets Platform, Cross domain (cross-domain), Chemical biology (chemical-biology), Drug discovery, Drug target identification, UniRule, ARBA, Automated annotation, MetaboLights: Metabolomics repository and reference database, Chemical Entities of Biological Interest, ChEBI, Metabolites, Molecular building blocks of life, Human Cell Atlas Data Coordination Platform, Single-cell transcriptomics, HCA data portal, Programmatic access, API, Python, Complex Portal, macromolecular assembly, InterPro, Boolean modelling, Europe PubMed Central, Literature (literature), Open access, Protein Data Bank in Europe - Knowledge Base, 3D structure, AlphaFold Database, DeepMind, Artificial intelligence, AI, Structure prediction, cancer, Boolean, Ensembl Genomes, DNA & RNA (dna-rna), European Nucleotide Archive, Data archive, Raw sequencing data, RNAcentral, Non-coding RNA, ncRNA, GPU, Data protection, Job dispatcher, Bioimage analysis resource, Accessibility, Missense variation, Biostatistics, Rfam, non-coding RNA, Infernal software, Sequence annotation, Root microbiome, Abiotic stress, land management, Plant genotype, Plant webinar series, HPC, database development, cross-linked databases, Plant database, data infrastructure, Plant breeding, Data standards, data managemnet, data sharing, Hyb-Seq method, Flowering plants, Crop improvement, Pangenomics, Pangenomes, Virtual humans, Drug-target identification, plant-microbe interactions, Spatial transcriptomics, Plant research, Drug targets, Machine learning, Mathematical modelling, plant science, Data integration, plant-environment interaction, Phenotyping, field phenotyping, Deep phenotyping, EOSC-Life, NHGRI-EBI GWAS Catalog, clinical data, genome-wide association, Proteomics, Proteomes, Peptide search, plants, European Variation Archive, EVA, Variant clusters, Variant data annotation, Constraint-based metabolic modelling, UniProt knowledgebase, protein variant impact, disease-associated protein variants, Bioethics, FAIR principles, ELSI, cohort data, translational research, BioModels database, Mathematical modeling, Reproducibity, Systems biology models, workflows, federated analysis, polygenic risk scores, IntAct Molecular Interaction Database, PSICQUIC, IMEx, Complex portal, Agent-based modelling, Macrophages, Tumorigenesis, Ensembl, Training (Training), On-demand, teaching, introduction, Building blocks, Data analysis, COSMIC, Cancer mutation, Somatic mutation, UniFIRE, Protein annotation, ChEMBL: Bioactive data for drug discovery, Chemical compounds, drug-like molecules, Chemogenomics, Biocurator, Programming, Data management, Green Algorithms, Open data, Environmental impact, Carbon footprint, HPC workflows, Orchestrator, Gene expression (gene-expression), Chemosensitivity assay, Experimental protocols, Drug screening, MICHA, European Genome-phenome Archive, EGA, restricted access, UniProt, Introduction, UniProtKB, Proteome, Protein Data Bank in Europe, genes, Introductory, GDPR, Data security, Expression Atlas, Pfam, protein sequence search, Domain architecture, Protein taxonomy, Beginner

Organizer: European Bioinformatics Institute (EBI)

Target audience: Plant research, Plant research

Capacity: 1000

Event types:

  • Workshops and courses

Scientific topics: Bioinformatics

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