Date: 12 - 16 February 2024

Gain an introduction to the technology, data analysis, tools, and resources used in RNA sequencing and transcriptomics. The content will provide a broad overview of the subject area, and introduce participants to basic analysis of transcriptomics data using the command line. It will also highlight key public data repositories and methodologies that can be used to start the biological interpretation of expression data. Topics will be delivered using a mixture of lectures, practical exercises, and open discussions. Computational work during the course will use small, example data-sets; and there will be no opportunity to analyse personal data.

 

Virtual course

Participants will learn via a mix of pre-recorded lectures, live presentations, and trainer Q&A sessions. Practical experience will be developed through group activities and trainer-led computational exercises. Live sessions will be delivered using Zoom with additional support and asynchronous communication via Slack.

Pre-recorded material may be provided before the course starts that participants will need to watch, read, or work through to gain the most out of the actual training event. In the week before the course, there will be a brief induction session. Computational practicals will run on EMBL-EBI's virtual training infrastructure, meaning participants will not require access to a powerful computer or install complex software on their own machines.

Participants will need to be available between the hours of 09:00 – 16:00 hrs GMT each day of the course. Trainers will be available to assist, answer questions, and provide further explanations during these times.

 

 

Keywords: RNA-Seq, Transcriptome assembly, Transcriptomics, Network analysis, Gene transcripts

Organizer: European Bioinformatics Institute (EBI)

Capacity: 35

Event types:

  • Workshops and courses

Scientific topics: RNA-Seq analysis, Function analysis, Gene expression profile


Activity log