Open access: Why build open source software and how to do it successfully
Date: 13 October 2021 @ 09:00 - 17:00
Continuing our series of webinars on the topic of open access, during this webinar we will define what open software is, discuss motivations and challenges of producing open code and software, as well as basic concepts that help to do so.
We will explain the many forms and dimensions of open software and its development, highlighting the importance of documentation, testing, packaging, communication and community in order to create successful and sustainable software.
Speakers
Renato Alves, Bio-IT EMBL
Following a PhD in human bacterial metagenomics and metatranscriptomics I took the role of Bio-IT project coordinator at EMBL Heidelberg, providing computational support to the research community at EMBL. For over 15 years I have contributed to several open and closed-source software projects using a multitude of programming languages and technologies from web to big data and cloud.
Brice Letcher, EMBL-EBI
I am a 4th year PhD student at the Iqbal lab working in computational microbial genomics. In my PhD I develop an open-source tool to build and genotype graphs of genomes. I am passionate about good software engineering and a keen contributor to the bioinformatics community, notably through building a formatting tool for snakemake (workflow manager) files.
Keywords: Cross domain (cross-domain), Open access, Open software
Organizer: European Bioinformatics Institute (EBI)
Target audience: Plant research, Plant research
Capacity: 1000
Event types:
- Workshops and courses
Scientific topics: Software engineering
Activity log