Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Algorithms4
    • Computer programming4
    • Data structures4
    • Exomes4
    • Genome annotation4
    • Genomes4
    • Genomics4
    • Personal genomics4
    • Programming languages4
    • Software development4
    • Software engineering4
    • Synthetic genomics4
    • Viral genomics4
    • Whole genomes4
    • Comparative transcriptomics3
    • Transcriptome3
    • Transcriptomics3
    • Biological sequences2
    • Sequence analysis2
    • Sequence databases2
    • Assembly1
    • Function analysis1
    • Functional analysis1
    • Low complexity sequences1
    • Nucleic acid repeats1
    • Protein function analysis1
    • Protein function prediction1
    • Protein repeats1
    • Protein sequence features1
    • Protein sequence repeats1
    • Protein sites, features and motifs1
    • Repeat sequences1
    • Sequence assembly1
    • Sequence complexity1
    • Sequence composition1
    • Sequence composition, complexity and repeats1
    • Sequence repeats1
    • Signal peptide cleavage sites1
    • Show N_FILTERS more
    • Tool
    • Galaxy7
    • Cutadapt2
    • FASTQE2
    • FastQC2
    • NanoPlot2
    • pycoQC2
    • Apollo1
    • BEDTools1
    • BLAST1
    • BUSCO1
    • Diamond1
    • InterProScan (EBI)1
    • JBrowse1
    • Merqury1
    • QUAST1
    • RED1
    • RepeatMasker1
    • RepeatModeler1
    • Trimmomatic1
    • Trinity1
    • eggNOG-mapper v21
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training15
    • Show N_FILTERS more
    • Keyword
    • Genome Annotation4
    • Development in Galaxy3
    • Transcriptomics3
    • Sequence analysis2
    • biodiversity2
    • eukaryote2
    • Assembly1
    • Galaxy Server administration1
    • Introduction to Galaxy Analyses1
    • ansible1
    • apollo21
    • gmod1
    • interactive-tools1
    • prokaryote1
    • work-in-progress1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner
    • Intermediate10
    • Advanced1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International15
    • Show N_FILTERS more
    • Target audience
    • Students11
    • Galaxy Administrators4
    • Show N_FILTERS more
    • Author
    • Anthony Bretaudeau
    • Helena Rasche85
    • Bérénice Batut82
    • SIB Swiss Institute of Bioinformatics79
    • Saskia Hiltemann49
    • Björn Grüning32
    • Anton Nekrutenko22
    • Yvan Le Bras22
    • Nicola Soranzo20
    • Nate Coraor19
    • Simon Gladman19
    • Subina Mehta18
    • Wendi Bacon18
    • Katarzyna Kamieniecka17
    • Krzysztof Poterlowicz17
    • Marie Josse17
    • Anne Fouilloux16
    • Fotis E. Psomopoulos16
    • Bazante Sanders14
    • Mehmet Tekman14
    • Julia Jakiela13
    • Katherine Do13
    • Maria Doyle13
    • The Carpentries13
    • Anup Kumar11
    • Dave Clements10
    • Donny Vrins10
    • James Johnson10
    • Khaled Jum'ah10
    • Mijke Jetten10
    • Pavankumar Videm10
    • Geert van Geest9
    • Lucille Delisle9
    • Wandrille Duchemin9
    • Anika Erxleben8
    • Celia van Gelder8
    • Cristóbal Gallardo8
    • Elisabeth Gasteiger8
    • Helen Brown8
    • Paul Zierep8
    • Daniel Blankenberg7
    • Delphine Lariviere7
    • Joachim Wolff7
    • John Chilton7
    • Kaivan Kamali7
    • Korbinian Bösl7
    • Laura Cooper7
    • Marius van den Beek7
    • Martin Čech7
    • Robert Andrews7
    • Sergio Martínez Cuesta7
    • Wolfgang Maier7
    • Allegra Via6
    • Andrew Mason6
    • Anne Pajon6
    • Branka Franicevic6
    • Coline Royaux6
    • ELIXIR Goblet Train the Trainers6
    • Melanie Föll6
    • Michael Charleston6
    • Morgan Howells6
    • Patricia Palagi6
    • Philippe Le Mercier6
    • Philippe Rocca-Serra6
    • Sara Morsy6
    • Valentin Loux6
    • Xenia Perez Sitja6
    • Alex Ostrovsky5
    • Alexandre Cormier5
    • Anna Syme5
    • Beatriz Serrano-Solano5
    • Clemens Blank5
    • Dechen Bhuming5
    • Egon Willighagen5
    • Erwan Corre5
    • Hans-Rudolf Hotz5
    • Hélène Chiapello5
    • Kellie Snow5
    • Korneel Hens5
    • Laura Leroi5
    • Marie-Claude Blatter5
    • Mira Kuntz5
    • Munazah Andrabi5
    • Nick Juty5
    • Personalized Health Informatics Group5
    • Pratik Jagtap5
    • Saskia Lawson-Tovey5
    • Stéphanie Robin5
    • Alireza Khanteymoori4
    • Ana-Claudia Sima4
    • Diana Chiang Jurado4
    • Eija Korpelainen4
    • Emma Griffiths4
    • Florian Heyl4
    • Frédéric de Lamotte4
    • Gildas Le Corguillé4
    • Grégoire Rossier4
    • Leonid Kostrykin4
    • Mallory Freeberg4
    • Marc Robinson-Rechavi4
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann14
    • Helena Rasche13
    • Anthony Bretaudeau10
    • Björn Grüning10
    • Bérénice Batut8
    • Cristóbal Gallardo7
    • Nicola Soranzo6
    • Alexandre Cormier3
    • Gildas Le Corguillé3
    • Niall Beard3
    • William Durand3
    • Mateo Boudet2
    • Simon Bray2
    • Swathi Nataraj2
    • Xavier Garnier2
    • Alaa-Elghamry1
    • Anika Erxleben1
    • Anne Fouilloux1
    • Anup Kumar1
    • Armin Dadras1
    • Dave Clements1
    • Gianmauro Cuccuru1
    • Jonathan Kreplak1
    • José Manuel Domínguez1
    • Laura Leroi1
    • Lucille Delisle1
    • Maria Doyle1
    • Marius van den Beek1
    • Martin Čech1
    • Matthias Bernt1
    • Natalie Kucher1
    • Nate Coraor1
    • Simon Gladman1
    • Stéphanie Robin1
    • Teresa Müller1
    • Tomas Klingström1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Resource type
    • slides8
    • e-learning7
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets12
    • Associated Workflows7
    • Quarto/RMarkdown Notebook6
    • ansible1
    • apollo21
    • gmod1
    • interactive-tools1
    • work-in-progress1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Difficulty level: Beginner

and Authors: Anthony Bretaudeau

15 materials found
  • e-learning

    Masking repeats with RepeatMasker

    • beginner
    Genomics Sequence composition, complexity and repeats Genome Annotation biodiversity eukaryote
  • e-learning

    Functional annotation of protein sequences

    • beginner
    Genomics Function analysis Protein sites, features and motifs Genome Annotation biodiversity eukaryote
  • e-learning

    Creating an Official Gene Set

    • beginner
    Genomics Genome Annotation apollo2 gmod work-in-progress
  • slides

    Refining Genome Annotations with Apollo

    • beginner
    Genomics Genome Annotation prokaryote
  • e-learning

    De novo transcriptome assembly, annotation, and differential expression analysis

    • beginner
    Transcriptomics
  • e-learning

    RNA-Seq analysis with AskOmics Interactive Tool

    • beginner
    Transcriptomics
  • slides

    Integrate and query local datasets and distant RDF data with AskOmics using Semantic Web technologies

    • beginner
    Transcriptomics
  • e-learning

    Galaxy Interactive Tools

    • beginner
    Software engineering Galaxy Server administration ansible interactive-tools
  • slides

    Tool Shed: sharing Galaxy tools

    • beginner
    Software engineering Development in Galaxy
  • slides

    Options for using Galaxy

    • beginner
    Introduction to Galaxy Analyses
  • 1
  • 2
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.