Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • DNA variation4
    • Genetic variation4
    • Genomic variation4
    • Mutation4
    • Polymorphism4
    • Somatic mutations4
    • Antimicrobial stewardship3
    • Assembly3
    • Exomes3
    • Genome annotation3
    • Genomes3
    • Genomics3
    • Medical microbiology3
    • Microbial genetics3
    • Microbial physiology3
    • Microbial surveillance3
    • Microbiological surveillance3
    • Microbiology3
    • Molecular infection biology3
    • Molecular microbiology3
    • Personal genomics3
    • Sequence assembly3
    • Synthetic genomics3
    • Viral genomics3
    • Whole genomes3
    • Biological sequences1
    • Comparative transcriptomics1
    • DNA polymorphism1
    • Microsatellites1
    • RFLP1
    • SNP1
    • Sequence analysis1
    • Sequence databases1
    • Single nucleotide polymorphism1
    • Transcriptome1
    • Transcriptomics1
    • VNTR1
    • Variable number of tandem repeat polymorphism1
    • snps1
    • Show N_FILTERS more
    • Tool
    • Galaxy9
    • BWA5
    • FreeBayes3
    • lofreq3
    • BEDTools2
    • FastQC2
    • SAMtools2
    • SRA Software Toolkit2
    • Vcflib2
    • fastp2
    • snpEff2
    • BamTools1
    • Bwa-mem21
    • Circos1
    • GEMINI1
    • Galactic Circos1
    • MultiQC1
    • Unicycler1
    • compute_sequence_length1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training13
    • Show N_FILTERS more
    • Keyword
    • Variant Analysis4
    • Introduction to Galaxy Analyses3
    • Using Galaxy and Managing your Data3
    • microgalaxy3
    • prokaryote3
    • Assembly2
    • collections2
    • Transcriptomics1
    • biodiversity1
    • covid191
    • gmod1
    • jbrowse11
    • one-health1
    • virology1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner11
    • Advanced1
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International13
    • Show N_FILTERS more
    • Target audience
    • Students13
    • Show N_FILTERS more
    • Author
    • Anton Nekrutenko
    • Helena Rasche44
    • Bérénice Batut35
    • Björn Grüning33
    • Saskia Hiltemann27
    • Nate Coraor17
    • Simon Gladman15
    • Nicola Soranzo14
    • Dave Clements9
    • Maria Doyle9
    • Anika Erxleben7
    • Anne Pajon7
    • Anthony Bretaudeau7
    • Florian Christoph Sigloch7
    • Joachim Wolff7
    • Martin Čech7
    • Clemens Blank5
    • Marius van den Beek5
    • Yvan Le Bras5
    • Daniel Blankenberg4
    • Delphine Lariviere4
    • James Johnson4
    • John Chilton4
    • Lucille Delisle4
    • Mallory Freeberg4
    • Pratik Jagtap4
    • Subina Mehta4
    • Timothy J. Griffin4
    • Anna Syme3
    • Belinda Phipson3
    • Cyril Monjeaud3
    • Gianmauro Cuccuru3
    • Mehmet Tekman3
    • Mira Kuntz3
    • Mo Heydarian3
    • Praveen Kumar3
    • Ray Sajulga3
    • Vivek Bhardwaj3
    • Wolfgang Maier3
    • Youri Hoogstrate3
    • Alexandre Cormier2
    • Andrea Bagnacani2
    • Anne Fouilloux2
    • Aysam Guerler2
    • Christopher Barnett2
    • Cristóbal Gallardo2
    • Dannon Baker2
    • Erwan Corre2
    • Fidel Ramirez2
    • Florian Heyl2
    • Hans-Rudolf Hotz2
    • Harriet Dashnow2
    • Khaled Jum'ah2
    • Laura Leroi2
    • Melanie Föll2
    • Michele Maroni2
    • Nadia Goué2
    • Olha Nahorna2
    • Pavankumar Videm2
    • Stéphanie Robin2
    • Torsten Seemann2
    • Abdulrahman Azab1
    • Ahmed Hamid Awan1
    • Alaa Elghamry1
    • Alex Ostrovsky1
    • Anna Trigos1
    • Cameron Hyde1
    • Chao Zhang1
    • Charity Law1
    • Daniel Maticzka1
    • Devon Ryan1
    • Diana Chiang Jurado1
    • Dilmurat Yusuf1
    • Ekaterina Polkh1
    • Engy Nasr1
    • Fabio Cumbo1
    • Friederike Dündar1
    • Graham Etherington1
    • Hervé Ménager1
    • José Manuel Domínguez1
    • Jovana Maksimovic1
    • Katarzyna Kamieniecka1
    • Krzysztof Poterlowicz1
    • Loraine Guéguen1
    • Markus Wolfien1
    • Marzia A Cremona1
    • Matt Ritchie1
    • Matthias Bernt1
    • Matthias Fahrner1
    • Menna Gamal1
    • Nick Stoler1
    • Nuwan Goonasekera1
    • Paul Zierep1
    • Peter van Heusden1
    • Sarah Peter1
    • Shian Su1
    • Stéphanie Legras1
    • Torfinn Nome1
    • Torsten Houwaart1
    • Valentin Marcon1
    • Show N_FILTERS more
    • Contributor
    • Nicola Soranzo
    • Saskia Hiltemann24
    • Björn Grüning22
    • Helena Rasche22
    • Bérénice Batut16
    • Anton Nekrutenko14
    • Niall Beard12
    • William Durand10
    • Anthony Bretaudeau4
    • Cristóbal Gallardo4
    • Delphine Lariviere4
    • Maria Doyle4
    • Teresa Müller4
    • Armin Dadras3
    • Dave Clements3
    • Gildas Le Corguillé3
    • Marius van den Beek3
    • Mélanie Petera3
    • Nate Coraor3
    • Anna Syme2
    • Linelle Abueg2
    • Wolfgang Maier2
    • Ahmed Hamid Awan1
    • Alex Ostrovsky1
    • Alexandre Cormier1
    • Beatriz Serrano-Solano1
    • Daniela Schneider1
    • David López1
    • Deepti Varshney1
    • Donny Vrins1
    • Ekaterina Polkh1
    • Enis Afgan1
    • John Davis1
    • Lucille Delisle1
    • Martin Čech1
    • Mateo Boudet1
    • Matthias Bernt1
    • Mehmet Tekman1
    • Nic Herndon1
    • TheKharleeci1
    • Vijay1
    • Show N_FILTERS more
    • Resource type
    • e-learning13
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets12
    • Associated Workflows8
    • Quarto/RMarkdown Notebook4
    • collections1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Authors: Anton Nekrutenko

and Contributors: Nicola Soranzo

13 materials found
  • e-learning

    Multisample Analysis

    ••• advanced
    Using Galaxy and Managing your Data collections
  • e-learning

    Making sense of a newly assembled genome

    • beginner
    Sequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote
  • e-learning

    Calling variants in non-diploid systems

    • beginner
    Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote
  • e-learning

    From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis

    • beginner
    Genetic variation Variant Analysis covid19 one-health virology
  • e-learning

    Using dataset collections

    •• intermediate
    Using Galaxy and Managing your Data collections
  • e-learning

    Unicycler Assembly

    • beginner
    Sequence assembly Genomics Microbiology Assembly biodiversity microgalaxy prokaryote
  • e-learning

    Reference-based RNAseq data analysis (long)

    • beginner
    Transcriptomics
  • e-learning

    Understanding Galaxy history system

    • beginner
    Using Galaxy and Managing your Data
  • e-learning

    IGV Introduction

    • beginner
    Introduction to Galaxy Analyses
  • e-learning

    NGS data logistics

    • beginner
    Introduction to Galaxy Analyses
  • 1
  • 2
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.