Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Community analysis
    • Biological sequences6
    • Sequence analysis6
    • Sequence databases6
    • Metagenomics5
    • Shotgun metagenomics5
    • Assembly4
    • Environmental microbiology4
    • Microbial ecology4
    • Microbiome4
    • Molecular community analysis4
    • Sequence assembly4
    • Taxonomy4
    • Epidemiology3
    • Public health3
    • Public health and epidemiology3
    • Antimicrobial stewardship2
    • De novo genome sequencing2
    • Epigenomics2
    • Exomes2
    • Function analysis2
    • Functional analysis2
    • Genome annotation2
    • Genome sequencing2
    • Genomes2
    • Genomics2
    • Medical microbiology2
    • Metatranscriptomics2
    • Microbial genetics2
    • Microbial physiology2
    • Microbial surveillance2
    • Microbiological surveillance2
    • Microbiology2
    • Molecular infection biology2
    • Molecular microbiology2
    • Personal genomics2
    • Protein function analysis2
    • Protein function prediction2
    • Synthetic genomics2
    • Viral genomics2
    • WGS2
    • Whole genome resequencing2
    • Whole genome sequencing2
    • Whole genomes2
    • AMR1
    • Antibiotic resistance (ABR)1
    • Antifungal resistance1
    • Antimicrobial resistance1
    • Antiprotozoal resistance1
    • Antiviral resistance1
    • Comparative transcriptomics1
    • DNA variation1
    • Disease1
    • Extensive drug resistance (XDR)1
    • Genetic variation1
    • Genomic variation1
    • Multidrug resistance1
    • Multiple drug resistance (MDR)1
    • Multiresistance1
    • Mutation1
    • Pandrug resistance (PDR)1
    • Pathology1
    • Polymorphism1
    • Somatic mutations1
    • Total drug resistance (TDR)1
    • Transcriptome1
    • Transcriptomics1
    • Show N_FILTERS more
    • Tool
    • FastQC
    • Galaxy13
    • taxonomy_krona_chart7
    • kraken25
    • KrakenTools4
    • MetaPhlAn4
    • Bracken3
    • MultiQC3
    • Newick Utilities3
    • fastp3
    • mothur3
    • Cutadapt2
    • GraPhlAn2
    • HUMAnN22
    • Minimap22
    • Recentrifuge2
    • SortMeRNA2
    • export2graphlan2
    • ggplot22
    • humann2
    • ABRicate1
    • BCFtools1
    • BEDTools1
    • BamTools1
    • Bandage1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • Combine Metaphlan and HUMAnN1
    • Falco1
    • FastTree1
    • Flye1
    • Krona1
    • MLST1
    • Medaka1
    • NanoPlot1
    • SAMtools1
    • dada21
    • phyloseq1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training4
    • Show N_FILTERS more
    • Keyword
    • Microbiome4
    • microgalaxy4
    • metatranscriptomics2
    • Heatmap1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • beer1
    • citizen science1
    • cyoa1
    • metagenomics1
    • nanopore1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner4
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International4
    • Show N_FILTERS more
    • Target audience
    • Students4
    • Show N_FILTERS more
    • Author
    • Bérénice Batut
    • Pratik Jagtap3
    • Saskia Hiltemann3
    • Subina Mehta3
    • Emma Leith2
    • Engy Nasr2
    • Paul Zierep2
    • Praveen Kumar2
    • Ray Sajulga2
    • Polina Polunina1
    • Siyu Chen1
    • Teresa Müller1
    • Show N_FILTERS more
    • Contributor
    • Bérénice Batut4
    • Helena Rasche4
    • Saskia Hiltemann4
    • Björn Grüning3
    • Paul Zierep3
    • Christine Oger2
    • Cristóbal Gallardo2
    • Engy Nasr2
    • Deepti Varshney1
    • Hans-Rudolf Hotz1
    • Nuwan Goonasekera1
    • Siyu Chen1
    • Teresa Müller1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Resource type
    • e-learning4
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets4
    • Associated Workflows4
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Community analysis

and Authors: Bérénice Batut

and Tools: FastQC

4 materials found
  • e-learning

    Identification of the micro-organisms in a beer using Nanopore sequencing

    • beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Microbiome beer citizen science metagenomics microgalaxy nanopore
  • e-learning

    Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

    • beginner
    Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
  • e-learning

    Metatranscriptomics analysis using microbiome RNA-seq data (short)

    • beginner
    Metagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy
  • e-learning

    Metatranscriptomics analysis using microbiome RNA-seq data

    • beginner
    Metagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.