- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Exomes29
- Genome annotation29
- Genomes29
- Genomics29
- Personal genomics29
- Synthetic genomics29
- Viral genomics29
- Whole genomes29
- Biological sequences26
- Sequence analysis26
- Sequence databases26
- Assembly21
- Sequence assembly21
- Antimicrobial stewardship16
- Community analysis16
- Environmental microbiology16
- Medical microbiology16
- Metagenomics16
- Microbial ecology16
- Microbial genetics16
- Microbial physiology16
- Microbial surveillance16
- Microbiological surveillance16
- Microbiology16
- Microbiome16
- Molecular community analysis16
- Molecular infection biology16
- Molecular microbiology16
- Shotgun metagenomics16
- Taxonomy13
- Bottom-up proteomics12
- Discovery proteomics12
- MS-based targeted proteomics12
- MS-based untargeted proteomics12
- Metaproteomics12
- Peptide identification12
- Protein and peptide identification12
- Proteomics12
- Quantitative proteomics12
- Targeted proteomics12
- Top-down proteomics12
- Biodiversity11
- DNA variation8
- Epigenomics8
- Genetic variation8
- Genomic variation8
- Mutation8
- Polymorphism8
- Somatic mutations8
- Comparative transcriptomics7
- Transcriptome7
- Transcriptomics7
- Epidemiology6
- Public health6
- Public health and epidemiology6
- Bayesian methods5
- Biostatistics5
- DNA metabarcoding5
- De novo genome sequencing5
- Descriptive statistics5
- Environmental metabarcoding5
- Gaussian processes5
- Gene and protein families5
- Gene families5
- Gene family5
- Gene system5
- Genes, gene family or system5
- Genome sequencing5
- Inferential statistics5
- Markov processes5
- Metabarcoding5
- Multivariate statistics5
- Probabilistic graphical model5
- Probability5
- Protein families5
- Protein sequence classification5
- RNA metabarcoding5
- Statistics5
- Statistics and probability5
- WGS5
- Whole genome resequencing5
- Whole genome sequencing5
- eDNA metabarcoding5
- eRNA metabarcoding5
- Communicable disease4
- Computational ecology4
- Ecoinformatics4
- Ecological informatics4
- Ecology4
- Ecosystem science4
- Infectious disease4
- Metatranscriptomics4
- Proteogenomics4
- Transmissible disease4
- AMR3
- Antibiotic resistance (ABR)3
- Antifungal resistance3
- Antimicrobial resistance3
- Antiprotozoal resistance3
- Antiviral resistance3
- Show N_FILTERS more
-
-
-
Tool
- Galaxy111
- FastQC22
- SAMtools18
- BEDTools11
- JBrowse11
- MultiQC11
- fastp10
- BWA9
- Cutadapt9
- BUSCO8
- DeepTools8
- NanoPlot8
- QUAST8
- taxonomy_krona_chart8
- kraken27
- Bandage6
- STAR6
- BamTools5
- Falco5
- Flye5
- FreeBayes5
- GEMINI5
- Minimap25
- Trimmomatic5
- BCFtools4
- Bowtie 24
- Bwa-mem24
- KrakenTools4
- MetaPhlAn4
- ggplot24
- seqtk4
- Cardinal3
- Diamond3
- GenomeScope 2.03
- HISAT23
- Merqury3
- Newick Utilities3
- Stacks3
- Unicycler3
- bx-python3
- gfastats3
- mothur3
- scikit-learn3
- BLAST2
- Bakta2
- Biopython2
- Bracken2
- ChIPpeakAnno2
- FASTQE2
- FASTX-Toolkit2
- GraPhlAn2
- HUMAnN22
- InterProScan (EBI)2
- JBrowse 22
- MACS2
- Medaka2
- OMArk2
- RSeQC2
- Racon2
- RepeatMasker2
- Salmon2
- SortMeRNA2
- Trim Galore2
- UCSC Genome Browser Utilities2
- UMI-tools2
- Unipept2
- Vcflib2
- clusterProfiler2
- eggNOG-mapper v22
- ewastools2
- export2graphlan2
- funannotate2
- gffread2
- humann2
- metaQuantome2
- msConvert2
- pycoQC2
- snippy2
- staramr2
- tbl2gff32
- ABRicate1
- AUGUSTUS1
- Apollo1
- Bio3D1
- Bowtie1
- COMBAT-TB Workbench1
- Circos1
- Clair31
- Clustal 1.8 (Clustal W, Clustal X)1
- Clustal 2 (Clustal W, Clustal X)1
- Combine Metaphlan and HUMAnN1
- CoverM1
- DESeq21
- DropletUtils1
- FastTree1
- FeatureCounts1
- Filtlong1
- FlashLFQ1
- GAEVAL1
- GOseq1
- Show N_FILTERS more
-
-
-
Content provider
- Galaxy Training114
- Show N_FILTERS more
-
-
-
Keyword
- microgalaxy31
- biodiversity21
- Assembly16
- Genome Annotation13
- Microbiome13
- Proteomics12
- jbrowse112
- gmod10
- prokaryote9
- Epigenetics8
- Variant Analysis8
- assembly8
- Introduction to Galaxy Analyses7
- Transcriptomics7
- eukaryote7
- Sequence analysis6
- nanopore6
- DDA5
- Single Cell5
- Statistics and machine learning5
- plants5
- 16S4
- Ecology4
- illumina4
- metabarcoding4
- metagenomics4
- work-in-progress4
- ChIP-seq3
- Computational chemistry3
- EBV dataset3
- Genetic composition EBV class3
- QC3
- RAD-seq3
- amr3
- bacteria3
- covid193
- metatranscriptomics3
- one-health3
- EBV workflow2
- HeLa2
- Metabolomics2
- Using Galaxy and Managing your Data2
- collections2
- cyoa2
- eukaryota2
- human2
- maker2
- mouse2
- pacbio2
- 10x1
- Braker31
- Climate1
- Contributing to the Galaxy Training Material1
- EBV workflowz1
- Evolution1
- Heatmap1
- MIGHTS1
- Machine learning1
- Nanopore data analysis1
- Pan-cancer1
- Pathogens detection1
- Phylogenetic tree1
- SILAC1
- Species population EBV class1
- Species populations EBV class1
- VGP1
- animals1
- annotation1
- apollo21
- beer1
- bulk1
- cancer biomarkers1
- citizen science1
- cookbook1
- data handling1
- diversity1
- drosophila1
- español1
- essential genes1
- evolution1
- functional annotation1
- genome1
- helixer1
- imaging1
- interactive-tools1
- intermine1
- miRNA1
- network analysis1
- oncogenes and tumor suppressor genes1
- paper-replication1
- phylogenetics1
- phylogeny1
- plasmids1
- polishing1
- quality control1
- rna-seq1
- stress tolerance1
- taxonomic profiling1
- tnseq1
- tuberculosis1
- Show N_FILTERS more
-
-
-
Difficulty level
- Beginner91
- Intermediate20
- Advanced3
- Show N_FILTERS more
-
-
-
Target audience
- Students113
- Instructors1
- Show N_FILTERS more
-
-
-
Author
- Bérénice Batut31
- Anthony Bretaudeau12
- Saskia Hiltemann12
- Björn Grüning10
- Anton Nekrutenko9
- Helena Rasche8
- Delphine Lariviere7
- Wolfgang Maier7
- Anika Erxleben6
- Anna Syme6
- Cristóbal Gallardo6
- Florian Christoph Sigloch6
- Nicola Soranzo6
- Pratik Jagtap6
- Simon Gladman6
- Subina Mehta6
- Alexandre Cormier5
- Dave Clements5
- Emma Leith5
- Erwan Corre5
- Joachim Wolff5
- Laura Leroi5
- Stéphanie Robin5
- Clemens Blank4
- Mallory Freeberg4
- Mehmet Tekman4
- Paul Zierep4
- Pavankumar Videm4
- Praveen Kumar4
- Simon Bray4
- Timothy J. Griffin4
- Vivek Bhardwaj4
- Alex Ostrovsky3
- Anup Kumar3
- Bazante Sanders3
- Christopher Barnett3
- Daniel Blankenberg3
- Engy Nasr3
- Fidel Ramirez3
- Maria Doyle3
- Marie Crane3
- Melanie Föll3
- Mo Heydarian3
- Nadia Goué3
- Yvan Le Bras3
- Anne Fouilloux2
- Anne Pajon2
- Ekaterina Polkh2
- Friederike Dündar2
- Katarzyna Kamieniecka2
- Khaled Jum'ah2
- Krzysztof Poterlowicz2
- Leily Rabbani2
- Lucille Delisle2
- Peter van Heusden2
- Polina Polunina2
- Ray Sajulga2
- Romane LIBOUBAN2
- Sophia Hampe2
- Tharindu Senapathi2
- Torsten Seemann2
- Ahmed Hamid Awan1
- Beatriz Serrano-Solano1
- Belinda Phipson1
- Brandon Pickett1
- Brigida Gallone1
- Cameron Hyde1
- Chao Zhang1
- Christoph Stritt1
- Clea Siguret1
- Daniel Maticzka1
- Daniela Brites1
- Daniela Butano1
- David Christiany1
- Devon Ryan1
- Didier Debroas1
- Dilmurat Yusuf1
- Fabian Recktenwald1
- Fabio Cumbo1
- Florence Combes1
- Florian Heyl1
- Galo A. Goig1
- Giulio Formenti1
- Hans-Rudolf Hotz1
- Harriet Dashnow1
- Hui Tang1
- James Johnson1
- Jonathan Kreplak1
- Linelle Abueg1
- Marcella Sozzoni1
- Maren Stillger1
- Marius van den Beek1
- Marzia A Cremona1
- Mateo Boudet1
- Matthias Fahrner1
- Michele Maroni1
- Miguel Roncoroni1
- Nathan Dunn1
- Nick Stoler1
- Olha Nahorna1
- Show N_FILTERS more
-
-
-
Contributor
- Bérénice Batut
- Saskia Hiltemann245
- Helena Rasche211
- Björn Grüning198
- Nicola Soranzo64
- Cristóbal Gallardo50
- Anthony Bretaudeau42
- Niall Beard40
- Martin Čech34
- Gildas Le Corguillé31
- Armin Dadras30
- Mehmet Tekman30
- Wendi Bacon30
- Wolfgang Maier30
- Melanie Föll28
- Pavankumar Videm28
- Teresa Müller28
- William Durand28
- Subina Mehta23
- Simon Bray21
- Yvan Le Bras21
- Maria Doyle19
- Anup Kumar16
- Beatriz Serrano-Solano16
- Deepti Varshney13
- Julia Jakiela13
- Pratik Jagtap13
- Timothy J. Griffin13
- Lucille Delisle12
- Nate Coraor12
- Anne Fouilloux11
- Anton Nekrutenko10
- Pablo Moreno10
- Leonid Kostrykin9
- Paul Zierep9
- Simon Gladman9
- David López8
- Marisa Loach8
- Matthias Bernt8
- Mélanie Petera8
- Stéphanie Robin8
- Kaivan Kamali7
- Katherine Do7
- Marius van den Beek7
- Verena Moosmann7
- Alexandre Cormier6
- Clemens Blank6
- Hans-Rudolf Hotz6
- Mallory Freeberg6
- Morgan Howells6
- Alireza Khanteymoori5
- Anna Syme5
- Bert Droesbeke5
- Christopher Barnett5
- Delphine Lariviere5
- Florian Christoph Sigloch5
- Peter van Heusden5
- Clea Siguret4
- Diana Chiang Jurado4
- Florian Heyl4
- Linelle Abueg4
- Marie Josse4
- Amirhossein Naghsh Nilchi3
- Bazante Sanders3
- Coline Royaux3
- Dave Clements3
- Ekaterina Polkh3
- Engy Nasr3
- Joachim Wolff3
- Katarzyna Kamieniecka3
- Khaled Jum'ah3
- Mateo Boudet3
- Miaomiao Zhou3
- Timon Schlegel3
- Alex Ostrovsky2
- Anika Erxleben2
- Carlos Chee Mendonça2
- Christine Oger2
- Christoph Stritt2
- CicoZhang2
- Donny Vrins2
- Enis Afgan2
- Esteban Perez-Wohlfeil2
- Fabio Cumbo2
- Fidel Ramirez2
- Florence Combes2
- Graeme Tyson2
- Jayadev Joshi2
- Jennifer Hillman-Jackson2
- Jonathan Kreplak2
- Jonathan Manning2
- Kenza Bazi-Kabbaj2
- Laura Leroi2
- Leily Rabbani2
- Nadia Goué2
- Riccardo Massei2
- Romane LIBOUBAN2
- Solenne Correard2
- Swathi Nataraj2
- Thomas Wollmann2
- Show N_FILTERS more
-
-
-
Resource type
- e-learning109
- slides5
- Show N_FILTERS more
-
-
-
Related resource
- Associated Workflows
- Associated Training Datasets145
- Quarto/RMarkdown Notebook78
- Jupyter Notebook (with Solutions)12
- Jupyter Notebook (without Solutions)12
- ansible10
- git-gat9
- monitoring3
- collections2
- deploying2
- jobs2
- storage2
- Community1
- DDA1
- SIG1
- apollo21
- authentication1
- broken1
- cloud1
- features1
- gmod1
- tags1
- terraform1
- tools1
- work-in-progress1
- workflows1
- Show N_FILTERS more
-
- Show disabled materials
- Show archived materials
